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OpenMS and TOPP: Open Source Software for LC-MS Data Analysis

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OpenMS and TOPP: Open Source Software for LC-MS Data Analysis (English)

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Oliver Kohlbacher

4

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author name string

Andreas Bertsch

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1

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Clemens Gröpl

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2

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Knut Reinert

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3

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language of work or name

English

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publication date

13 October 2010

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published in

Methods in Molecular Biology

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page(s)

353-367

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cites work

OpenMS - an open-source software framework for mass spectrometry

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20 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1186/1471-2105-9-163

LC-MSsim--a simulation software for liquid chromatography mass spectrometry data

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27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1007/978-1-60761-987-1_23

SeqAn an efficient, generic C++ library for sequence analysis

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27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1007/978-1-60761-987-1_23

Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein database

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27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1007/978-1-60761-987-1_23

SIRIUS: decomposing isotope patterns for metabolite identification

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27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1007/978-1-60761-987-1_23

Probability-based protein identification by searching sequence databases using mass spectrometry data

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27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1007/978-1-60761-987-1_23

Open mass spectrometry search algorithm

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27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1007/978-1-60761-987-1_23

InsPecT: identification of posttranslationally modified peptides from tandem mass spectra

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1007/978-1-60761-987-1_23

TANDEM: matching proteins with tandem mass spectra

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1007/978-1-60761-987-1_23

Highly accelerated feature detection in proteomics data sets using modern graphics processing units

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1007/978-1-60761-987-1_23

TOPPView: an open-source viewer for mass spectrometry data

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1007/978-1-60761-987-1_23

The minimum information about a proteomics experiment (MIAPE)

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27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1007/978-1-60761-987-1_23

TOPP--the OpenMS proteomics pipeline

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1007/978-1-60761-987-1_23

De novo peptide sequencing by tandem MS using complementary CID and electron transfer dissociation

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27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1007/978-1-60761-987-1_23

Statistical learning of peptide retention behavior in chromatographic separations: a new kernel-based approach for computational proteomics

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1007/978-1-60761-987-1_23

Identifiers

DOI

10.1007/978-1-60761-987-1_23

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PubMed publication ID

21063960

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(Q57011809)

OpenMS and TOPP: Open Source Software for LC-MS Data Analysis

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