(Q57032028)

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Systematic expression alteration analysis of master reprogramming factor OCT4 and its three pseudogenes in human cancer and their prognostic outcomes

scientific article published in Scientific Reports

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scholarly article

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Systematic expression alteration analysis of master reprogramming factor OCT4 and its three pseudogenes in human cancer and their prognostic outcomes (English)

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object named as

Ssang-Goo Cho

4

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Subbroto Kumar Saha

object named as

Subbroto Kumar Saha

1

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author name string

Yeojin Jeong

2

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Sungha Cho

3

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language of work or name

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publication date

4 October 2018

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Scientific Reports

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8

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1

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14806

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copyright license

Creative Commons Attribution 4.0 International

4 October 2018

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April 2022 Public Data File from Crossref

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Endogenous authentic OCT4A proteins directly regulate FOS/AP-1 transcription in somatic cancer cells.

1 reference

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2 November 2018

Alternative Splicing Generates Different 5' UTRs in OCT4B Variants

1 reference

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2 November 2018

Novel variant of OCT4B4 is differentially expressed in human embryonic stem and embryonic carcinoma cells.

1 reference

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2 November 2018

Systematic analysis of gene expression alterations and clinical outcomes of adenylate cyclase-associated protein in cancer

1 reference

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2 November 2018

GEPIA: a web server for cancer and normal gene expression profiling and interactive analyses.

1 reference

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2 November 2018

The Pseudogene DUXAP8 Promotes Non-small-cell Lung Cancer Cell Proliferation and Invasion by Epigenetically Silencing EGR1 and RHOB.

1 reference

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2 November 2018

Distinctive expression pattern of OCT4 variants in different types of breast cancer

1 reference

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2 November 2018

Roles of OCT4 in tumorigenesis, cancer therapy resistance and prognosis

1 reference

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2 November 2018

miRpower: a web-tool to validate survival-associated miRNAs utilizing expression data from 2178 breast cancer patients

1 reference

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2 November 2018

Genomic Correlates of Immune-Cell Infiltrates in Colorectal Carcinoma

1 reference

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2 November 2018

Differential Expression of OCT4 Pseudogenes in Pluripotent and Tumor Cell Lines

1 reference

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2 November 2018

Oncogenomic portals for the visualization and analysis of genome-wide cancer data

1 reference

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2 November 2018

OCT4B modulates OCT4A expression as ceRNA in tumor cells.

1 reference

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2 November 2018

Global cancer statistics, 2012

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2 November 2018

PROGgeneV2: enhancements on the existing database

1 reference

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2 November 2018

STRING v10: protein-protein interaction networks, integrated over the tree of life

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

The Oct4 protein: more than a magic stemness marker

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Overexpression of Oct4 suppresses the metastatic potential of breast cancer cells via Rnd1 downregulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Expression and differentiation between OCT4A and its Pseudogenes in human ESCs and differentiated adult somatic cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

The pseudogene TUSC2P promotes TUSC2 function by binding multiple microRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Differential expression of Oct4 variants and pseudogenes in normal urothelium and urothelial cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

OCT4 promotes tumorigenesis and inhibits apoptosis of cervical cancer cells by miR-125b/BAK1 pathway

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Pseudogene OCT4-pg4 functions as a natural micro RNA sponge to regulate OCT4 expression by competing for miR-145 in hepatocellular carcinoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Pluripotency transcription factors and cancer stem cells: small genes make a big difference

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

STRING v9.1: protein-protein interaction networks, with increased coverage and integration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

OCT4 positively regulates Survivin expression to promote cancer cell proliferation and leads to poor prognosis in esophageal squamous cell carcinoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Global cancer transitions according to the Human Development Index (2008-2030): a population-based study.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

OCT4 spliced variant OCT4B1 is expressed in human colorectal cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Pseudogenes: pseudo-functional or key regulators in health and disease?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Expression of OCT4 pseudogenes in human tumours: lessons from glioma and breast carcinoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Global cancer statistics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Mutated KRAS results in overexpression of DUSP4, a MAP-kinase phosphatase, and SMYD3, a histone methyltransferase, in rectal carcinomas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Human haematopoietic stem cells express Oct4 pseudogenes and lack the ability to initiate Oct4 promoter-driven gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Rab27a and Rab27b control different steps of the exosome secretion pathway

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Alternative translation of OCT4 by an internal ribosome entry site and its novel function in stress response.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

PrognoScan: a new database for meta-analysis of the prognostic value of genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Gene expression profiling of the tumor microenvironment during breast cancer progression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

The POU5F1P1 pseudogene encodes a putative protein similar to POU5F1 isoform 1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

OCT4 spliced variants are differentially expressed in human pluripotent and nonpluripotent cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Functional copy-number alterations in cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Positive correlations of Oct-4 and Nanog in oral cancer stem-like cells and high-grade oral squamous cell carcinoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Oct4 and its pseudogenes confuse stem cell research.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Association of genetic variants at 8q24 with breast cancer risk

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Oct4 expression is not required for mouse somatic stem cell self-renewal

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Secreted frizzled-related protein 1 loss contributes to tumor phenotype of clear cell renal cell carcinoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Genome-wide association study identifies a second prostate cancer susceptibility variant at 8q24.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Oncomine 3.0: genes, pathways, and networks in a collection of 18,000 cancer gene expression profiles

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

OCT-4, an embryonic stem cell marker, is highly expressed in bladder cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

The human OCT-4 isoforms differ in their ability to confer self-renewal

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Breast tumor copy number aberration phenotypes and genomic instability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Oct4 pseudogenes are transcribed in cancers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Human embryonic stem cell genes OCT4, NANOG, STELLAR, and GDF3 are expressed in both seminoma and breast carcinoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Oct4 expression in adult human stem cells: evidence in support of the stem cell theory of carcinogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

ONCOMINE: a cancer microarray database and integrated data-mining platform

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Human embryonic genes re-expressed in cancer cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6172215

2 November 2018

Oct-4 expression in inner cell mass and trophectoderm of human blastocysts

1 reference

https://api.crossref.org/works/10.1038%2FS41598-018-33094-7

7 January 2021

based on heuristic

inferred from DOI database lookup

Expression of the embryonic transcription factor Oct4 in canine neoplasms: a potential marker for stem cell subpopulations in neoplasia

1 reference

https://api.crossref.org/works/10.1038%2FS41598-018-33094-7

7 January 2021

based on heuristic

inferred from DOI database lookup

Small RNAs: Pseudogenes act as microRNA decoys

1 reference

https://api.crossref.org/works/10.1038%2FS41598-018-33094-7

7 January 2021

based on heuristic

inferred from DOI database lookup

Prognostic value of cyclin D2 mRNA expression in newly diagnosed multiple myeloma treated with high-dose chemotherapy and tandem autologous stem cell transplantations

1 reference

https://api.crossref.org/works/10.1038%2FS41598-018-33094-7

7 January 2021

based on heuristic

inferred from DOI database lookup

Conclusive Evidence for OCT4 Transcription in Human Cancer Cell Lines: Possible Role of a Small OCT4-Positive Cancer Cell Population

1 reference

https://api.crossref.org/works/10.1038%2FS41598-018-33094-7

7 January 2021

based on heuristic

inferred from DOI database lookup

OncoLnc: linking TCGA survival data to mRNAs, miRNAs, and lncRNAs

1 reference

https://opencitations.net/index/coci/api/v1/citations/10.7717/PEERJ-CS.67

25 March 2023

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10.1038/S41598-018-33094-7

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