(Q57167613)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30149572%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

title

Comparative Transcriptomics of Root Development in Wild and Cultivated Carrots (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30149572%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

0 references

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30149572%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

Alicja Macko-Podgórni

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30149572%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

Dariusz Grzebelus

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30149572%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

author name string

Gabriela Machaj

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30149572%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

Massimo Iorizzo

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30149572%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

language of work or name

English

0 references

publication date

24 August 2018

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30149572%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30149572%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

volume

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30149572%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

issue

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30149572%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

20 April 2020

copyright license

start time

24 August 2018

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

edgeR

object named as

edgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

DESeq2

object named as

DESeq2

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

The carrot secreted glycoprotein gene EP1 is expressed in the epidermis and has sequence homology to Brassica S-locus glycoproteins.

1 reference

12 December 2020

Plant Development: Regulation by Protein Degradation

1 reference

12 December 2020

Mitosis in plants: how far we have come at the molecular level?

1 reference

12 December 2020

The plant cytoskeleton: recent advances in the study of the plant microtubule-associated proteins MAP-65, MAP-190 and the Xenopus MAP215-like protein, MOR1.

1 reference

12 December 2020

The bHLH genes GLABRA3 (GL3) and ENHANCER OF GLABRA3 (EGL3) specify epidermal cell fate in the Arabidopsis root.

1 reference

12 December 2020

Oxidative remodeling of plastid carotenoids

1 reference

12 December 2020

The ubiquitin-proteasome pathway and plant development

1 reference

12 December 2020

SUGARS IN THE ROOT OF THE CARROT.

1 reference

12 December 2020

Sugar sensing and signaling in plants: conserved and novel mechanisms

1 reference

12 December 2020

Cell cycle regulation in plant development

1 reference

12 December 2020

Regulation of the Arabidopsis root vascular initial population by LONESOME HIGHWAY.

1 reference

12 December 2020

The Arabidopsis E3 SUMO ligase SIZ1 regulates plant growth and drought responses

1 reference

12 December 2020

A gain-of-function mutation of transcriptional factor PTL results in curly leaves, dwarfism and male sterility by affecting auxin homeostasis.

1 reference

12 December 2020

Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 forms a nuclear E3 ubiquitin ligase with DDB1 and CUL4 that is involved in multiple plant developmental processes

1 reference

12 December 2020

Callose synthesis in higher plants

1 reference

12 December 2020

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

1 reference

12 December 2020

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

1 reference

12 December 2020

Overexpression of AHL20 negatively regulates defenses in Arabidopsis

1 reference

12 December 2020

De novo assembly and characterization of the carrot transcriptome reveals novel genes, new markers, and genetic diversity

1 reference

12 December 2020

Damage-specific DNA binding protein 1 (DDB1): a protein with a wide range of functions

1 reference

12 December 2020

Hormone signaling in plant development

1 reference

12 December 2020

Fast gapped-read alignment with Bowtie 2

1 reference

12 December 2020

The AT-hook motif-containing protein AHL22 regulates flowering initiation by modifying FLOWERING LOCUS T chromatin in Arabidopsis

1 reference

12 December 2020

Transcriptome analysis of the roots at early and late seedling stages using Illumina paired-end sequencing and development of EST-SSR markers in radish

1 reference

12 December 2020

Digital gene expression analysis based on integrated de novo transcriptome assembly of sweet potato [Ipomoea batatas (L.) Lam].

1 reference

12 December 2020

STAR: ultrafast universal RNA-seq aligner

1 reference

12 December 2020

Genetic structure and domestication of carrot (Daucus carota subsp. sativus) (Apiaceae).

1 reference

12 December 2020

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

1 reference

12 December 2020

Redox regulation of plant development

1 reference

12 December 2020

Arabidopsis thaliana AHL family modulates hypocotyl growth redundantly by interacting with each other via the PPC/DUF296 domain.

1 reference

12 December 2020

Diversity, genetic mapping, and signatures of domestication in the carrot (Daucus carota L.) genome, as revealed by Diversity Arrays Technology (DArT) markers.

1 reference

12 December 2020

A miR169 isoform regulates specific NF-YA targets and root architecture in Arabidopsis

1 reference

12 December 2020

Trimmomatic: a flexible trimmer for Illumina sequence data

1 reference

12 December 2020

New insights into domestication of carrot from root transcriptome analyses

1 reference

12 December 2020

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

1 reference

12 December 2020

Sequencing, assembly, annotation, and gene expression: novel insights into the hormonal control of carrot root development revealed by a high-throughput transcriptome

1 reference

12 December 2020

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

1 reference

12 December 2020

Posttranslational Protein Modifications in Plant Metabolism

1 reference

12 December 2020

Near-optimal probabilistic RNA-seq quantification

1 reference

12 December 2020

A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.

1 reference

12 December 2020

Characterization of a Genomic Region under Selection in Cultivated Carrot (Daucus carota subsp. sativus) Reveals a Candidate Domestication Gene.

1 reference

12 December 2020

MYB30 links ROS signaling, root cell elongation, and plant immune responses

1 reference

12 December 2020

Identifiers

DOI

10.3390/GENES9090431

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30149572%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30149572%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

1 reference