(Q57205907)

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DNA Methylation and Mycoplasma Genomes

article published in 2003

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scholarly article

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DNA Methylation and Mycoplasma Genomes (English)

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object named as

Xuhua Xia

1

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publication date

1 August 2003

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Journal of Molecular Evolution

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57

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0

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S21-S28

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https://scigraph.springernature.com/pub.10.1007/s00239-003-0003-6

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The neighbor-joining method: a new method for reconstructing phylogenetic trees

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https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

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Doublet frequencies in evolutionary distinct groups

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https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

based on heuristic

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The complete genome sequence of the murine respiratory pathogen Mycoplasma pulmonis

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https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

based on heuristic

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What drives codon choices in human genes?

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https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

based on heuristic

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Transcription-induced mutations: increase in C to T mutations in the nontranscribed strand during transcription in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

based on heuristic

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Procaryotic and eucaryotic traits of DNA methylation in spiroplasmas (mycoplasmas).

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

based on heuristic

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Methylated bases in mycoplasmal DNA.

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https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

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Enzymatic synthesis of deoxyribonucleic acid. VIII. Frequencies of nearest neighbor base sequences in deoxyribonucleic acid

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

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Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees

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https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

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Pervasive CpG suppression in animal mitochondrial genomes

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https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

based on heuristic

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Dinucleotide relative abundance extremes: a genomic signature

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

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The expected equilibrium of the CpG dinucleotide in vertebrate genomes under a mutation model

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

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DAMBE: software package for data analysis in molecular biology and evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

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Compositional biases of bacterial genomes and evolutionary implications

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

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Basic local alignment search tool

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

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Cloning, characterization, and expression in Escherichia coli of the gene coding for the CpG DNA methylase from Spiroplasma sp. strain MQ1(M.SssI).

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

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Strand symmetry around the beta-globin origin of replication in primates

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

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Rapid detection of functional expression of C-5-DNA methyltransferases in yeast

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

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Cytosine methylation: the pros and cons of DNA methylation

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

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Deamination as the basis of strand-asymmetric evolution in transcribed Escherichia coli sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Correlation between transcription and C to T mutations in the non-transcribed DNA strand.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reconstructing evolutionary trees from DNA and protein sequences: paralinear distances

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

based on heuristic

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Recovering evolutionary trees under a more realistic model of sequence evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcription-induced cytosine-to-thymine mutations are not dependent on sequence context of the target cytosine

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

based on heuristic

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5-Methylcytosine as an Endogenous Mutagen in the Human LDL Receptor and p53 Genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

based on heuristic

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Causal analysis of CpG suppression in the Mycoplasma genome.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea

1 reference

https://pubmed.ncbi.nlm.nih.gov/15008400

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00239-003-0003-6

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