(Q57264109)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30158584%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

title

An imputation platform to enhance integration of rice genetic resources (English)

1 reference

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20 April 2020

0 references

1 reference

1

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20 April 2020

Dmitri Chebotarev

3

1 reference

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20 April 2020

Jonathan Marchini

5

1 reference

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20 April 2020

Melissa A Fitzgerald

6

1 reference

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20 April 2020

Kenneth L McNally

7

1 reference

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20 April 2020

Nickolai Alexandrov

8

1 reference

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20 April 2020

Susan R McCouch

9

1 reference

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20 April 2020

author name string

Francisco J Agosto-Pérez

2

1 reference

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20 April 2020

Yuxin Shi

4

1 reference

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20 April 2020

language of work or name

English

0 references

publication date

29 August 2018

1 reference

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20 April 2020

published in

Nature Communications

1 reference

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20 April 2020

volume

9

1 reference

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20 April 2020

issue

1

1 reference

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20 April 2020

page(s)

3519

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https://scigraph.springernature.com/pub.10.1038/s41467-018-05538-1

20 April 2020

exact match

0 references

cites work

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The buffering capacity of stems: genetic architecture of nonstructural carbohydrates in cultivated Asian rice, Oryza sativa

2 November 2018

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Rapid identification of a new gene influencing low amylose content in rice landraces (Oryza sativa L.) using genome-wide association study with specific-locus amplified fragment sequencing

2 November 2018

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RPAN: rice pan-genome browser for ∼3000 rice genomes

2 November 2018

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A reference panel of 64,976 haplotypes for genotype imputation

2 November 2018

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Combined effects of Wx and SSIIa haplotypes on rice starch physicochemical properties.

2 November 2018

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Open access resources for genome-wide association mapping in rice.

2 November 2018

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Whole genome sequencing of elite rice cultivars as a comprehensive information resource for marker assisted selection

2 November 2018

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The Tyrosine Aminomutase TAM1 Is Required for β-Tyrosine Biosynthesis in Rice

2 November 2018

1 reference

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Widely distributed hot and cold spots in meiotic recombination as shown by the sequencing of rice F2 plants

2 November 2018

1 reference

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SNP-Seek database of SNPs derived from 3000 rice genomes

2 November 2018

1 reference

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Geographic population structure analysis of worldwide human populations infers their biogeographical origins

2 November 2018

1 reference

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Bridging the genotyping gap: using genotyping by sequencing (GBS) to add high-density SNP markers and new value to traditional bi-parental mapping and breeding populations

2 November 2018

1 reference

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Improved whole-chromosome phasing for disease and population genetic studies

2 November 2018

1 reference

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An integrated map of genetic variation from 1,092 human genomes

2 November 2018

1 reference

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rehh: an R package to detect footprints of selection in genome-wide SNP data from haplotype structure

2 November 2018

1 reference

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Genotype imputation with thousands of genomes

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6115364

Comprehensive literature review and statistical considerations for GWAS meta-analysis

2 November 2018

1 reference

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Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6115364

A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6115364

Genome-wide association studies of 14 agronomic traits in rice landraces.

2 November 2018

1 reference

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Integrating common and rare genetic variation in diverse human populations

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6115364

Genotype imputation for genome-wide association studies

2 November 2018

1 reference

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Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities

2 November 2018

1 reference

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2 November 2018

1 reference

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A flexible and accurate genotype imputation method for the next generation of genome-wide association studies

2 November 2018

1 reference

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A second generation human haplotype map of over 3.1 million SNPs

2 November 2018

1 reference

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Genome-wide patterns of nucleotide polymorphism in domesticated rice

2 November 2018

1 reference

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Selection under domestication: evidence for a sweep in the rice waxy genomic region

2 November 2018

1 reference

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A haplotype map of the human genome

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6115364

The map-based sequence of the rice genome

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6115364

Genetic structure and diversity in Oryza sativa L

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6115364

Rice genome organization: the centromere and genome interactions

2 November 2018

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A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

2 November 2018

1 reference

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An integrated physical and genetic map of the rice genome

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6115364

A single base change altered the regulation of the Waxy gene at the posttranscriptional level during the domestication of rice

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6115364

Aberrant splicing of intron 1 leads to the heterogeneous 5' UTR and decreased expression of waxy gene in rice cultivars of intermediate amylose content

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6115364

Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6115364

Skim-based genotyping by sequencing

30 November 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41467-018-05538-1

7 January 2021

CGtag: complete genomics toolkit and annotation in a cloud-based Galaxy

1 reference

https://api.crossref.org/works/10.1038%2FS41467-018-05538-1

7 January 2021

A naturally occurring functional allele of the rice waxy locus has a GT to TT mutation at the 5' splice site of the first intron

1 reference

https://api.crossref.org/works/10.1038%2FS41467-018-05538-1

7 January 2021

Nucleotide diversity in starch synthase IIa and validation of single nucleotide polymorphisms in relation to starch gelatinization temperature and other physicochemical properties in rice (Oryza sativa L.).

1 reference

https://api.crossref.org/works/10.1038%2FS41467-018-05538-1

7 January 2021

10.1038/S41467-018-05538-1

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30158584%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30158584%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

PubMed publication ID

30158584

1 reference