(Q57466939)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30317555%20AND%20SRC:MED&resulttype=core&format=json

28 April 2020

2 references

2 October 2020

16 September 2022

Systems vaccinology and big data in the vaccine development chain (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30317555%20AND%20SRC:MED&resulttype=core&format=json

28 April 2020

0 references

1 reference

1 reference

2 October 2020

1

1 reference

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28 April 2020

author name string

Elly van Riet

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30317555%20AND%20SRC:MED&resulttype=core&format=json

28 April 2020

Hugo D Meiring

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30317555%20AND%20SRC:MED&resulttype=core&format=json

28 April 2020

Bernard Metz

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30317555%20AND%20SRC:MED&resulttype=core&format=json

28 April 2020

Gideon F A Kersten

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30317555%20AND%20SRC:MED&resulttype=core&format=json

28 April 2020

language of work or name

English

0 references

publication date

13 November 2018

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30317555%20AND%20SRC:MED&resulttype=core&format=json

28 April 2020

1 January 2019

2 references

2 October 2020

16 September 2022

3 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30317555%20AND%20SRC:MED&resulttype=core&format=json

28 April 2020

2 October 2020

16 September 2022

156

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30317555%20AND%20SRC:MED&resulttype=core&format=json

28 April 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30317555%20AND%20SRC:MED&resulttype=core&format=json

28 April 2020

page(s)

33-46

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30317555%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial

28 April 2020

copyright license

2 references

2 October 2020

16 September 2022

Characterization of peptides bound to the class I MHC molecule HLA-A2.1 by mass spectrometry

1 reference

12 December 2020

KEGG: Kyoto Encyclopedia of Genes and Genomes

1 reference

12 December 2020

Gene ontology: tool for the unification of biology

1 reference

12 December 2020

1 reference

12 December 2020

Computational systems biology

1 reference

12 December 2020

Gene expression profiling of plasma cells and plasmablasts: toward a better understanding of the late stages of B-cell differentiation

1 reference

12 December 2020

Cytoscape: a software environment for integrated models of biomolecular interaction networks

1 reference

12 December 2020

Immunoproteomics: Mass spectrometry-based methods to study the targets of the immune response

1 reference

12 December 2020

Systems biology: its practice and challenges

1 reference

12 December 2020

Vaccinology at the beginning of the 21st century

1 reference

12 December 2020

Determination of protein-derived epitopes by mass spectrometry

1 reference

12 December 2020

Selective identification of newly synthesized proteins in mammalian cells using bioorthogonal noncanonical amino acid tagging (BONCAT)

1 reference

12 December 2020

Lung response to Bordetella pertussis infection in mice identified by gene-expression profiling

1 reference

12 December 2020

A systems biology approach for pathway level analysis

1 reference

12 December 2020

Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?

1 reference

12 December 2020

Molecular and cellular signatures of human vaccine adjuvants.

1 reference

12 December 2020

InnateDB: facilitating systems-level analyses of the mammalian innate immune response.

1 reference

12 December 2020

INTERFEROME: the database of interferon regulated genes

1 reference

12 December 2020

Systems biology approach predicts immunogenicity of the yellow fever vaccine in humans

1 reference

12 December 2020

Yellow fever vaccine induces integrated multilineage and polyfunctional immune responses

1 reference

12 December 2020

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

1 reference

12 December 2020

Selective enrichment of azide-containing peptides from complex mixtures

1 reference

12 December 2020

In silico-accelerated identification of conserved and immunogenic variola/vaccinia T-cell epitopes.

1 reference

12 December 2020

The key role of genomics in modern vaccine and drug design for emerging infectious diseases

1 reference

12 December 2020

BioGPS: an extensible and customizable portal for querying and organizing gene annotation resources

1 reference

12 December 2020

Correlates of protection induced by vaccination

1 reference

12 December 2020

Systems level studies of mammalian metabolomes: the roles of mass spectrometry and nuclear magnetic resonance spectroscopy

1 reference

12 December 2020

An interferon-inducible neutrophil-driven blood transcriptional signature in human tuberculosis

1 reference

12 December 2020

Development of a Novel Cross-linking Strategy for Fast and Accurate Identification of Cross-linked Peptides of Protein Complexes

1 reference

12 December 2020

1 reference

12 December 2020

Broadly cross-reactive antibodies dominate the human B cell response against 2009 pandemic H1N1 influenza virus infection

1 reference

12 December 2020

Early patterns of gene expression correlate with the humoral immune response to influenza vaccination in humans

1 reference

12 December 2020

Fc-glycosylation of IgG1 is modulated by B-cell stimuli

1 reference

12 December 2020

Systems biology approaches to new vaccine development

1 reference

12 December 2020

High throughput cellular screens to interrogate the human T and B cell repertoires

1 reference

12 December 2020

Unraveling molecular signatures of immunostimulatory adjuvants in the female genital tract through systems biology

1 reference

12 December 2020

Comparative analysis of proteome and transcriptome variation in mouse

1 reference

12 December 2020

Systemic signature of the lung response to respiratory syncytial virus infection

1 reference

12 December 2020

Systems biology of vaccination for seasonal influenza in humans

1 reference

12 December 2020

A neutralizing antibody selected from plasma cells that binds to group 1 and group 2 influenza A hemagglutinins

1 reference

12 December 2020

Identification of biomarkers for tuberculosis disease using a novel dual-color RT-MLPA assay.

1 reference

12 December 2020

Systems vaccinology: learning to compute the behavior of vaccine induced immunity

1 reference

12 December 2020

Transcriptional profiling of vaccine-induced immune responses in humans and non-human primates

1 reference

12 December 2020

Changes in antigen-specific IgG1 Fc N-glycosylation upon influenza and tetanus vaccination

1 reference

12 December 2020

Systems analysis of MVA-C induced immune response reveals its significance as a vaccine candidate against HIV/AIDS of clade C.

1 reference

12 December 2020

Pandemic H1N1 influenza vaccine induces a recall response in humans that favors broadly cross-reactive memory B cells

1 reference

12 December 2020

Selective enrichment of newly synthesized proteins for quantitative secretome analysis

1 reference

12 December 2020

Functional immunoimaging: the revolution continues.

1 reference

12 December 2020

Broadly neutralizing antiviral antibodies

1 reference

12 December 2020

Complex correlates of protection after vaccination

1 reference

12 December 2020

Transcriptional profiling technology for studying vaccine responses: an untapped goldmine

1 reference

12 December 2020

Apoptosis and other immune biomarkers predict influenza vaccine responsiveness

1 reference

12 December 2020

Systems scale interactive exploration reveals quantitative and qualitative differences in response to influenza and pneumococcal vaccines

1 reference

12 December 2020

Using epigenetics to define vaccine-induced memory T cells

1 reference

12 December 2020

Vaccinomics, adversomics, and the immune response network theory: individualized vaccinology in the 21st century

1 reference

12 December 2020

A systems analysis identifies a feedforward inflammatory circuit leading to lethal influenza infection

1 reference

12 December 2020

Lipidomic profiling of influenza infection identifies mediators that induce and resolve inflammation

1 reference

12 December 2020

Immunosignatures can predict vaccine efficacy

1 reference

12 December 2020

Discovery of protective B-cell epitopes for development of antimicrobial vaccines and antibody therapeutics.

1 reference

12 December 2020

Whole blood gene expression profiles to assess pathogenesis and disease severity in infants with respiratory syncytial virus infection

1 reference

12 December 2020

Molecular signatures of antibody responses derived from a systems biology study of five human vaccines

1 reference

12 December 2020

Rapid temporal dynamics of transcription, protein synthesis, and secretion during macrophage activation

1 reference

12 December 2020

Transcriptome in vivo analysis (TIVA) of spatially defined single cells in live tissue

1 reference

12 December 2020

The promise and challenge of high-throughput sequencing of the antibody repertoire.

1 reference

12 December 2020

Unifying immunology with informatics and multiscale biology.

1 reference

12 December 2020

Single-cell technologies for monitoring immune systems.

1 reference

12 December 2020

Nonhuman primate and human challenge models of pertussis

1 reference

12 December 2020

A systems biology approach to the analysis of subset-specific responses to lipopolysaccharide in dendritic cells.

1 reference

12 December 2020

System vaccinology for the evaluation of influenza vaccine safety by multiplex gene detection of novel biomarkers in a preclinical study and batch release test.

1 reference

12 December 2020

Machine learning-based methods for prediction of linear B-cell epitopes

1 reference

12 December 2020

T-cell epitope prediction methods: an overview

1 reference

12 December 2020

Identification of a human neonatal immune-metabolic network associated with bacterial infection

1 reference

12 December 2020

Systems vaccinology: probing humanity's diverse immune systems with vaccines

1 reference

12 December 2020

Molecular signatures of the evolving immune response in mice following a Bordetella pertussis infection.

1 reference

12 December 2020

Single-nucleotide polymorphism associations in common with immune responses to measles and rubella vaccines

1 reference

12 December 2020

Rapid development of broadly influenza neutralizing antibodies through redundant mutations

1 reference

12 December 2020

High-resolution enabled 12-plex DiLeu isobaric tags for quantitative proteomics

1 reference

12 December 2020

Host-microorganism interactions in lung diseases

1 reference

12 December 2020

Development and use of molecular markers: past and present

1 reference

12 December 2020

T cell immunity. Functional heterogeneity of human memory CD4⁺ T cell clones primed by pathogens or vaccines

1 reference

12 December 2020

A method for high-throughput, sensitive analysis of IgG Fc and Fab glycosylation by capillary electrophoresis

1 reference

12 December 2020

Genetics and vaccines in the era of personalized medicine

1 reference

12 December 2020

High-throughput data analysis and data integration for vaccine trials

1 reference

12 December 2020

Using Transcriptional Signatures to Assess Immune Cell Function: From Basic Mechanisms to Immune-Related Disease

1 reference

12 December 2020

Immunoproteomic Profiling of Bordetella pertussis Outer Membrane Vesicle Vaccine Reveals Broad and Balanced Humoral Immunogenicity.

1 reference

12 December 2020

Proteomic contributions to our understanding of vaccine and immune responses

1 reference

12 December 2020

1 reference

12 December 2020

Application of "Systems Vaccinology" to Evaluate Inflammation and Reactogenicity of Adjuvanted Preventative Vaccines

1 reference

12 December 2020

Definition of Proteasomal Peptide Splicing Rules for High-Efficiency Spliced Peptide Presentation by MHC Class I Molecules

1 reference

12 December 2020

Proteome-wide profiling of protein assemblies by cross-linking mass spectrometry.

1 reference

12 December 2020

Dissecting Polyclonal Vaccine-Induced Humoral Immunity against HIV Using Systems Serology

1 reference

12 December 2020

Measles Virus Epitope Presentation by HLA: Novel Insights into Epitope Selection, Dominance, and Microvariation

1 reference

12 December 2020

Single-cell technologies are revolutionizing the approach to rare cells

1 reference

12 December 2020

Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures

1 reference

12 December 2020

The role of structural proteomics in vaccine development: recent advances and future prospects

1 reference

12 December 2020

Pre-vaccination inflammation and B-cell signalling predict age-related hyporesponse to hepatitis B vaccination

1 reference

12 December 2020

Systems biology of immunity to MF59-adjuvanted versus nonadjuvanted trivalent seasonal influenza vaccines in early childhood

1 reference

12 December 2020

Viral infection causes a shift in the self peptide repertoire presented by human MHC class I molecules

1 reference

12 December 2020

Impact of host genetic polymorphisms on vaccine induced antibody response

1 reference

12 December 2020

Comparative Analysis of the Endogenous Peptidomes Displayed by HLA-B*27 and Mamu-B*08: Two MHC Class I Alleles Associated with Elite Control of HIV/SIV Infection

1 reference

12 December 2020

Integrated Omics Analysis of Pathogenic Host Responses during Pandemic H1N1 Influenza Virus Infection: The Crucial Role of Lipid Metabolism.

1 reference

12 December 2020

Neucode Labels for Multiplexed, Absolute Protein Quantification

1 reference

12 December 2020

Antigen-Specific Antibody Glycosylation Is Regulated via Vaccination

1 reference

12 December 2020

System-Wide Associations between DNA-Methylation, Gene Expression, and Humoral Immune Response to Influenza Vaccination

1 reference

12 December 2020

Proteasomes generate spliced epitopes by two different mechanisms and as efficiently as non-spliced epitopes

1 reference

12 December 2020

Transcriptome signature for dampened Th2 dominance in acellular pertussis vaccine-induced CD4(+) T cell responses through TLR4 ligation.

1 reference

12 December 2020

Epitope location for two monoclonal antibodies against human cystatin C, representing opposite aggregation inhibitory properties

1 reference

12 December 2020

Mass Cytometry of the Human Mucosal Immune System Identifies Tissue- and Disease-Associated Immune Subsets.

1 reference

12 December 2020

Early Transcriptional Signatures of the Immune Response to a Live Attenuated Tetravalent Dengue Vaccine Candidate in Non-human Primates

1 reference

12 December 2020

Gut microbiota, metabolites and host immunity

1 reference

12 December 2020

VDJviz: a versatile browser for immunogenomics data.

1 reference

12 December 2020

Mass spectrometric epitope mapping.

1 reference

12 December 2020

Immunological Signatures after Bordetella pertussis Infection Demonstrate Importance of Pulmonary Innate Immune Cells

1 reference

12 December 2020

Divide and conquer: cleavable cross-linkers to study protein conformation and protein-protein interactions

1 reference

12 December 2020

A large fraction of HLA class I ligands are proteasome-generated spliced peptides.

1 reference

12 December 2020

Bordetella pertussis outer membrane vesicle vaccine confers equal efficacy in mice with milder inflammatory responses compared to a whole-cell vaccine.

1 reference

12 December 2020

Comparative Systems Analyses Reveal Molecular Signatures of Clinically tested Vaccine Adjuvants

1 reference

12 December 2020

Safety and Immunogenicity of the Recombinant Mycobacterium bovis BCG Vaccine VPM1002 in HIV-Unexposed Newborn Infants in South Africa

1 reference

12 December 2020

Proteome Analysis Is a Valuable Tool to Monitor Antigen Expression during Upstream Processing of Whole-Cell Pertussis Vaccines.

1 reference

12 December 2020

Cell-Based Systems Biology Analysis of Human AS03-Adjuvanted H5N1 Avian Influenza Vaccine Responses: A Phase I Randomized Controlled Trial

1 reference

12 December 2020

Systems serology for evaluation of HIV vaccine trials

1 reference

12 December 2020

Systems analysis of protective immune responses to RTS,S malaria vaccination in humans

1 reference

12 December 2020

Resolving host-pathogen interactions by dual RNA-seq

1 reference

12 December 2020

Meta-Analysis of Pulmonary Transcriptomes from Differently Primed Mice Identifies Molecular Signatures to Differentiate Immune Responses following Bordetella pertussis Challenge.

1 reference

12 December 2020

Systematic Analysis of Cell-Type Differences in the Epithelial Secretome Reveals Insights into the Pathogenesis of Respiratory Syncytial Virus-Induced Lower Respiratory Tract Infections

1 reference

12 December 2020

Development of large-scale cross-linking mass spectrometry

1 reference

12 December 2020

Mass spectrometry-based proteomic exploration of the human immune system: focus on the inflammasome, global protein secretion, and T cells.

1 reference

12 December 2020

Metabolic Phenotypes of Response to Vaccination in Humans

1 reference

12 December 2020

Transcriptomics technologies.

1 reference

12 December 2020

Predicting RTS,S Vaccine-Mediated Protection from Transcriptomes in a Malaria-Challenge Clinical Trial

1 reference

12 December 2020

Massively parallel nanowell-based single-cell gene expression profiling

1 reference

12 December 2020

Deciphering the MHC-associated peptidome: a review of naturally processed ligand data

1 reference

12 December 2020

Simultaneous epitope and transcriptome measurement in single cells

1 reference

12 December 2020

Personalized vaccinology: A review

1 reference

12 December 2020

Systems Vaccinology Identifies an Early Innate Immune Signature as a Correlate of Antibody Responses to the Ebola Vaccine rVSV-ZEBOV.

1 reference

12 December 2020

Molecular and cellular signatures underlying superior immunity against Bordetella pertussis upon pulmonary vaccination.

1 reference

12 December 2020

Profiling MHC II immunopeptidome of blood-stage malaria reveals that cDC1 control the functionality of parasite-specific CD4 T cells.

1 reference

12 December 2020

VDJdb: a curated database of T-cell receptor sequences with known antigen specificity

1 reference

12 December 2020

Single-cell transcriptomics to explore the immune system in health and disease

1 reference

12 December 2020

Will Systems Biology Deliver Its Promise and Contribute to the Development of New or Improved Vaccines? From Data to Understanding through Systems Biology

1 reference

12 December 2020

Beyond binding: antibody effector functions in infectious diseases.

1 reference

12 December 2020

Prospects from systems serology research

1 reference

12 December 2020

IL17eScan: A Tool for the Identification of Peptides Inducing IL-17 Response

1 reference

12 December 2020

Visual analysis of mass cytometry data by hierarchical stochastic neighbour embedding reveals rare cell types.

1 reference

12 December 2020

Molecular Signatures of Immunity and Immunogenicity in Infection and Vaccination

1 reference

12 December 2020

The role of mass spectrometry and proteogenomics in the advancement of HLA epitope prediction

1 reference

12 December 2020

Novel identified aluminum hydroxide-induced pathways prove monocyte activation and pro-inflammatory preparedness.

1 reference

12 December 2020

Cell type discovery and representation in the era of high-content single cell phenotyping.

1 reference

12 December 2020

Transcriptomics in Human Challenge Models

1 reference

12 December 2020

Transcriptomic signatures of cellular and humoral immune responses in older adults after seasonal influenza vaccination identified by data-driven clustering

1 reference

12 December 2020

Precursors of human CD4+ cytotoxic T lymphocytes identified by single-cell transcriptome analysis

1 reference

12 December 2020

Mapping HLA-A2, -A3 and -B7 supertype-restricted T-cell epitopes in the ebolavirus proteome

1 reference

12 December 2020

A roadmap towards personalized immunology.

1 reference

12 December 2020

CEMiTool: a Bioconductor package for performing comprehensive modular co-expression analyses.

1 reference

12 December 2020

Lipidomic analysis of immune activation in equine leptospirosis and Leptospira-vaccinated horses.

1 reference

12 December 2020

Broad Immune Monitoring and Profiling of T Cell Subsets with Mass Cytometry.

1 reference

12 December 2020

Host-Pathogen Transcriptomics by Dual RNA-Seq

1 reference

12 December 2020

Proteome-wide mapping of immune features onto Plasmodium protein three-dimensional structures.

1 reference

12 December 2020

Molecular Signatures of a TLR4 Agonist-Adjuvanted HIV-1 Vaccine Candidate in Humans.

1 reference

12 December 2020

Adjuvant-Associated Peripheral Blood mRNA Profiles and Kinetics Induced by the Adjuvanted Recombinant Protein Candidate Tuberculosis Vaccine M72/AS01 in Bacillus Calmette-Guérin-Vaccinated Adults.

1 reference

12 December 2020

Integrative metabolomics and transcriptomics signatures of clinical tolerance to Plasmodium vivax reveal activation of innate cell immunity and T cell signaling.

1 reference

12 December 2020

Best practices for analysing microbiomes

1 reference

12 December 2020

The Human Vaccines Project: Towards a comprehensive understanding of the human immune response to immunization

1 reference

12 December 2020

The influence of the intestinal microbiome on vaccine responses

1 reference

12 December 2020

Transcriptomics of the Vaccine Immune Response: Priming With Adjuvant Modulates Recall Innate Responses After Boosting.

1 reference

12 December 2020

The Significance of the Intestinal Microbiome for Vaccinology: From Correlations to Therapeutic Applications

1 reference

12 December 2020

Non-specific effects of vaccines: Current evidence and potential implications

1 reference

12 December 2020

Transcriptional Profiling of Immune-Related Genes in Leishmania infantum-Infected Mice: Identification of Potential Biomarkers of Infection and Progression of Disease.

1 reference

12 December 2020

The potential of metabolic profiling for vaccine development

1 reference

12 December 2020

Effect of Antibiotic-Mediated Microbiome Modulation on Rotavirus Vaccine Immunogenicity: A Human, Randomized-Control Proof-of-Concept Trial

1 reference

12 December 2020

Systems analysis of human vaccine adjuvants

1 reference

12 December 2020

Neonate-omics: Charting the Unknown Immune Response in Early Life

1 reference

12 December 2020

Stereotypic Immune System Development in Newborn Children

1 reference

12 December 2020

Modeling Host-Pathogen Interactions in the Context of the Microenvironment: Three-Dimensional Cell Culture Comes of Age

1 reference

12 December 2020

Modulation of the gut microbiota to improve innate resistance

1 reference

12 December 2020

Identifiers

DOI

10.1111/IMM.13012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30317555%20AND%20SRC:MED&resulttype=core&format=json

28 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30317555%20AND%20SRC:MED&resulttype=core&format=json

28 April 2020

PubMed publication ID

30317555

1 reference