(Q58084076)

30 June 2019

title

Shared and distinct transcriptomic cell types across neocortical areas (English)

1 reference

30 June 2019

single cell transcriptomics

main subject

transcriptome

0 references

1 reference

A curated database reveals trends in single-cell transcriptomics

https://www.nxn.se/single-cell-studies/data.tsv

7 February 2021

5

Thuc Nghi Nguyen

1 reference

30 June 2019

B. Tasic

series ordinal

1

object named as

Tasic B

1 reference

30 June 2019

2

Yao Z

1 reference

30 June 2019

3

Graybuck LT

1 reference

30 June 2019

4

Smith KA

1 reference

30 June 2019

6

Bertagnolli D

1 reference

30 June 2019

7

Goldy J

1 reference

30 June 2019

8

Garren E

1 reference

30 June 2019

9

Economo MN

1 reference

30 June 2019

10

Viswanathan S

1 reference

30 June 2019

11

Penn O

1 reference

30 June 2019

12

Bakken T

1 reference

30 June 2019

13

Menon V

1 reference

30 June 2019

14

Miller J

1 reference

30 June 2019

15

Fong O

1 reference

30 June 2019

16

Hirokawa KE

1 reference

30 June 2019

17

Lathia K

1 reference

30 June 2019

18

Rimorin C

1 reference

30 June 2019

19

Tieu M

1 reference

30 June 2019

20

Larsen R

1 reference

30 June 2019

21

Casper T

1 reference

30 June 2019

22

Barkan E

1 reference

30 June 2019

23

Kroll M

1 reference

30 June 2019

24

Parry S

1 reference

30 June 2019

25

Shapovalova NV

1 reference

30 June 2019

26

Hirschstein D

1 reference

30 June 2019

27

Pendergraft J

1 reference

30 June 2019

28

Sullivan HA

1 reference

30 June 2019

29

Kim TK

1 reference

30 June 2019

30

Szafer A

1 reference

30 June 2019

31

Dee N

1 reference

30 June 2019

32

Groblewski P

1 reference

30 June 2019

33

Wickersham I

1 reference

30 June 2019

34

Cetin A

1 reference

30 June 2019

35

Harris JA

1 reference

30 June 2019

36

Levi BP

1 reference

30 June 2019

37

Sunkin SM

1 reference

30 June 2019

38

Madisen L

1 reference

30 June 2019

39

Daigle TL

1 reference

30 June 2019

40

Looger L

1 reference

30 June 2019

41

Bernard A

1 reference

30 June 2019

42

Phillips J

1 reference

30 June 2019

43

Lein E

1 reference

30 June 2019

44

Hawrylycz M

1 reference

30 June 2019

45

Svoboda K

1 reference

30 June 2019

46

Jones AR

1 reference

30 June 2019

47

Koch C

1 reference

30 June 2019

48

Zeng H

1 reference

30 June 2019

PMC publication ID

6456269

language of work or name

English

0 references

publication date

31 October 2018

1 reference

30 June 2019

external data available at URL

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE115746

1 reference

A curated database reveals trends in single-cell transcriptomics

https://www.nxn.se/single-cell-studies/data.tsv

7 February 2021

1 reference

30 June 2019

volume

563

1 reference

30 June 2019

issue

7729

1 reference

30 June 2019

page(s)

72-78

1 reference

30 June 2019

describes a project that uses

brain

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

https://www.nxn.se/single-cell-studies/data.tsv

1 reference

10 June 2022

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pmc&rettype=xml&id=6456269

RStudio

1 reference

18 June 2022

https://europepmc.org/article/PMC/6456269

inferred from PubMed Central ID database lookup

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/6456269

inferred from PubMed Central ID database lookup

exact match

https://scigraph.springernature.com/pub.10.1038/s41586-018-0654-5

0 references

cites work

A multi-modal parcellation of human cerebral cortex

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

An anatomic gene expression atlas of the adult mouse brain

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Cellular mechanisms of temporal sensitivity in visual cortex neurons

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

A Comparison of Visual Response Properties in the Lateral Geniculate Nucleus and Primary Visual Cortex of Awake and Anesthetized Mice.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Timing, timing, timing: fast decoding of object information from intracranial field potentials in human visual cortex

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

A Map of Anticipatory Activity in Mouse Motor Cortex.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Maintenance of persistent activity in a frontal thalamocortical loop.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Flow of cortical activity underlying a tactile decision in mice

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Neural mechanisms of movement planning: motor cortex and beyond

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Neuronal cell-type classification: challenges, opportunities and the path forward

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Neuronal subtype specification in the cerebral cortex

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Three groups of interneurons account for nearly 100% of neocortical GABAergic neurons

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Principles of connectivity among morphologically defined cell types in adult neocortex

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Reconstruction and Simulation of Neocortical Microcircuitry.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Adult mouse cortical cell taxonomy revealed by single cell transcriptomics

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Distinct descending motor cortex pathways and their roles in movement

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Transcriptomic and anatomic parcellation of 5-HT3AR expressing cortical interneuron subtypes revealed by single-cell RNA sequencing

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Differential expression of LIM-homeodomain factors in Cajal-Retzius cells of primates, rodents, and birds.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Cajal-Retzius cells: update on structural and functional properties of these mystic neurons that bridged the 20th century

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Genome-wide atlas of gene expression in the adult mouse brain

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

The neocortical circuit: themes and variations

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

A mesoscale connectome of the mouse brain

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

A motor cortex circuit for motor planning and movement

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Organization of the connections between claustrum and cortex in the mouse

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Large-scale cellular-resolution gene profiling in human neocortex reveals species-specific molecular signatures

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

New horizons for the subplate zone and its pioneering neurons

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Subset of Cortical Layer 6b Neurons Selectively Innervates Higher Order Thalamic Nuclei in Mice.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Three Types of Cortical Layer 5 Neurons That Differ in Brain-wide Connectivity and Function.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Strategies and Tools for Combinatorial Targeting of GABAergic Neurons in Mouse Cerebral Cortex

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Transcriptional Architecture of Synaptic Communication Delineates GABAergic Neuron Identity

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Chrna2-Martinotti Cells Synchronize Layer 5 Type A Pyramidal Cells via Rebound Excitation

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Electrophysiological, transcriptomic and morphologic profiling of single neurons using Patch-seq

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Single-cell analysis of experience-dependent transcriptomic states in the mouse visual cortex.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Deterministic progenitor behavior and unitary production of neurons in the neocortex.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Area patterning of the mammalian cortex

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Specification of cerebral cortical areas

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Thalamic control of neocortical area formation in mice.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Geniculocortical input drives genetic distinctions between primary and higher-order visual areas

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Massive loss of Cajal-Retzius cells does not disrupt neocortical layer order

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Extracortical origin of some murine subplate cell populations

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

The promise of spatial transcriptomics for neuroscience in the era of molecular cell typing.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Multiplex genome engineering using CRISPR/Cas systems

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Developmental and adult phenotyping directly from mutant embryonic stem cells

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

High-efficiency FLP and PhiC31 site-specific recombination in mammalian cells.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

A Designer AAV Variant Permits Efficient Retrograde Access to Projection Neurons

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Nontoxic, double-deletion-mutant rabies viral vectors for retrograde targeting of projection neurons.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Cre recombinase-mediated restoration of nigrostriatal dopamine in dopamine-deficient mice reverses hypophagia and bradykinesia

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Molecular taxonomy of major neuronal classes in the adult mouse forebrain

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

A manual method for the purification of fluorescently labeled neurons from the mammalian brain

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Acute brain slice methods for adult and aging animals: application of targeted patch clamp analysis and optogenetics

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Smart-seq2 for sensitive full-length transcriptome profiling in single cells.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

STAR: ultrafast universal RNA-seq aligner

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Software for computing and annotating genomic ranges

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

A Single-Cell Roadmap of Lineage Bifurcation in Human ESC Models of Embryonic Brain Development.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Resolution limit in community detection

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

limma powers differential expression analyses for RNA-sequencing and microarray studies

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

CellProfiler: free, versatile software for automated biological image analysis

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

dendextend: an R package for visualizing, adjusting and comparing trees of hierarchical clustering

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

WGCNA: an R package for weighted correlation network analysis

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Cajal-Retzius cells in the mouse: transcription factors, neurotransmitters, and birthdays suggest a pallial origin

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

A transcriptome database for astrocytes, neurons, and oligodendrocytes: a new resource for understanding brain development and function

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Oligodendrocyte heterogeneity in the mouse juvenile and adult central nervous system

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

An RNA-sequencing transcriptome and splicing database of glia, neurons, and vascular cells of the cerebral cortex.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Siglec-h on activated microglia for recognition and engulfment of glioma cells.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

New tools for studying microglia in the mouse and human CNS.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Pericytes: developmental, physiological, and pathological perspectives, problems, and promises

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Microarray analysis of blood microvessels from PDGF-B and PDGF-Rbeta mutant mice identifies novel markers for brain pericytes.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

A molecular census of arcuate hypothalamus and median eminence cell types

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Cell-type specific properties of pyramidal neurons in neocortex underlying a layout that is modifiable depending on the cortical area.

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Anatomical characterization of Cre driver mice for neural circuit mapping and manipulation

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

The spatial and temporal origin of chandelier cells in mouse neocortex

1 reference

https://api.crossref.org/works/10.1038%2FS41586-018-0654-5

7 January 2021

Evidence on precise time-coded symbols and memory of patterns in monkey cortical neuronal spike trains

1 reference

12 December 2020

Species identity of insect cell lines

1 reference

12 December 2020

1 reference

12 December 2020

Implantation of an artificial cornea employing full thickness onlay sclera and a sliding conjunctival graft

1 reference

12 December 2020

Case of mucocele of the frontal sinus

1 reference

12 December 2020

The evolution of the brain, the human nature of cortical circuits, and intellectual creativity

1 reference

12 December 2020

RNA-seq analysis is easy as 1-2-3 with limma, Glimma and edgeR.

1 reference

12 December 2020

10.1038/S41586-018-0654-5

Identifiers

DOI

1 reference

30 June 2019

PMC publication ID

6456269

1 reference

30 June 2019

PubMed publication ID

30382198

1 reference

30 June 2019