(Q58570131)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

title

Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps (English)

1 reference

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1 May 2020

1

1 reference

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1 May 2020

Benjamin Istace

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Franc-Christophe Baurens

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Mathieu Genete

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Anne-Marie Chèvre

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

France Denoeud

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Guillaume Martin

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Benjamin Noel

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Xavier Vekemans

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Mathieu Rousseau-Gueutin

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Jean-Marc Aury

26

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

author name string

Erwan Denis

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Marion Dubarry

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Cyril Falentin

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Wahiba Berrabah

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Régine Delourme

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Gwenaëlle Deniot

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Philippe Duffé

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Stefan Engelen

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Arnaud Lemainque

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Maria Manzanares-Dauleux

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Jérôme Morice

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Angélique D'Hont

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Valérie Barbe

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Corinne Cruaud

24

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Patrick Wincker

25

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

language of work or name

English

0 references

publication date

2 November 2018

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

1 reference

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1 May 2020

volume

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

issue

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

page(s)

879-887

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

Phased diploid genome assembly with single-molecule real-time sequencing.

1 May 2020

cites work

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

The impact of third generation genomic technologies on plant genome assembly

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell.

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

De Novo Assembly of a New Solanum pennellii Accession Using Nanopore Sequencing.

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

The map-based sequence of the rice genome

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Sequencing and de novo assembly of a near complete indica rice genome.

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity.

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

The genome of the extremophile crucifer Thellungiella parvula

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Genome sequencing and analysis of the model grass Brachypodium distachyon

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

The Rosa genome provides new insights into the domestication of modern roses.

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in Brassica rapa and Brassica oleracea.

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Brassica rapa Genome 2.0: A Reference Upgrade through Sequence Re-assembly and Gene Re-annotation.

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

The genome of the mesopolyploid crop species Brassica rapa

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

The banana (Musa acuminata) genome and the evolution of monocotyledonous plants

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Improvement of the banana "Musa acuminata" reference sequence using NGS data and semi-automated bioinformatics methods

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Genome mapping on nanochannel arrays for structural variation analysis and sequence assembly

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

The power of single molecule real-time sequencing technology in the de novo assembly of a eukaryotic genome

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Genomic analyses of primitive, wild and cultivated citrus provide insights into asexual reproduction

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Assembling large genomes with single-molecule sequencing and locality-sensitive hashing

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

The pangenome of an agronomically important crop plant Brassica oleracea

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Contrasted patterns of molecular evolution in dominant and recessive self-incompatibility haplotypes in Arabidopsis

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Genomic Organization of theS-Locus Region ofBrassica

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Targeted Long-Read Sequencing of a Locus Under Long-Term Balancing Selection in Capsella.

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

The genome sequence of allopolyploid Brassica juncea and analysis of differential homoeolog gene expression influencing selection

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

The genome of Chenopodium quinoa.

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data.

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Genome assembly with in vitro proximity ligation data and whole-genome triplication in lettuce

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

The draft genome of tropical fruit durian (Durio zibethinus).

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

SOAP: short oligonucleotide alignment program

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Centrifuge: rapid and sensitive classification of metagenomic sequences

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Fast and accurate de novo genome assembly from long uncorrected reads.

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

CARHTA GENE: multipopulation integrated genetic and radiation hybrid mapping

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

BLAT—The BLAST-Like Alignment Tool

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Plant genetics. Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

A fast and symmetric DUST implementation to mask low-complexity DNA sequences

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Tandem repeats finder: a program to analyze DNA sequences

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

GeneWise and Genomewise

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

BUSCO applications from quality assessments to gene prediction and phylogenomics

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

MUMmer4: A fast and versatile genome alignment system.

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

1 reference

https://api.crossref.org/works/10.1038%2FS41477-018-0289-4

7 January 2021

10.1038/S41477-018-0289-4

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30390080%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

1 reference