(Q58695738)

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Multi-omics integrative analysis with genome-scale metabolic model simulation reveals global cellular adaptation of Aspergillus niger under industrial enzyme production condition

scientific article published in Scientific Reports

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scholarly article

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24 April 2020

Multi-omics integrative analysis with genome-scale metabolic model simulation reveals global cellular adaptation of Aspergillus niger under industrial enzyme production condition (English)

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24 April 2020

Aspergillus niger

object named as

Aspergillus niger

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inferred from title

3

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24 April 2020

author name string

Hongzhong Lu

1

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24 April 2020

Weiqiang Cao

2

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24 April 2020

Yufei Sui

4

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24 April 2020

Liming Ouyang

5

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24 April 2020

Jianye Xia

6

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24 April 2020

Mingzhi Huang

7

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24 April 2020

Yingping Zhuang

8

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24 April 2020

Siliang Zhang

9

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24 April 2020

Henk Noorman

10

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24 April 2020

Ju Chu

11

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24 April 2020

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26 September 2018

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24 April 2020

Scientific Reports

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24 April 2020

8

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24 April 2020

14404

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24 April 2020

1

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24 April 2020

copyright license

Creative Commons Attribution 4.0 International

26 September 2018

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April 2022 Public Data File from Crossref

copyright status

0 references

Comprehensive reconstruction and in silico analysis of Aspergillus niger genome-scale metabolic network model that accounts for 1210 ORFs

1 reference

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30 November 2018

Integrated isotope-assisted metabolomics and (13)C metabolic flux analysis reveals metabolic flux redistribution for high glucoamylase production by Aspergillus niger

1 reference

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30 November 2018

Real-time metabolome profiling of the metabolic switch between starvation and growth

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30 November 2018

Genome-Wide Analysis of Hypoxia-Responsive Genes in the Rice Blast Fungus, Magnaporthe oryzae.

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Dependence of fungal characteristics on seed morphology and shear stress in bioreactors

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30 November 2018

Identification of hypoxia-inducible target genes of Aspergillus fumigatus by transcriptome analysis reveals cellular respiration as an important contributor to hypoxic survival

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30 November 2018

Deletion of flbA results in increased secretome complexity and reduced secretion heterogeneity in colonies of Aspergillus niger

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30 November 2018

Aspergilli: systems biology and industrial applications

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30 November 2018

Debottlenecking recombinant protein production in Bacillus megaterium under large-scale conditions--targeted precursor feeding designed from metabolomics.

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30 November 2018

Integration of in vivo and in silico metabolic fluxes for improvement of recombinant protein production

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30 November 2018

The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources

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30 November 2018

Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0

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30 November 2018

Analysis of the Aspergillus fumigatus proteome reveals metabolic changes and the activation of the pseurotin A biosynthesis gene cluster in response to hypoxia

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30 November 2018

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Evolutionary systems biology of amino acid biosynthetic cost in yeast

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Intracellular metabolite determination in the presence of extracellular abundance: Application to the penicillin biosynthesis pathway in Penicillium chrysogenum

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30 November 2018

Mechanism of de novo branched-chain amino acid synthesis as an alternative electron sink in hypoxic Aspergillus nidulans cells

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30 November 2018

Physiology of Aspergillus niger in oxygen-limited continuous cultures: Influence of aeration, carbon source concentration and dilution rate

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30 November 2018

Oxygen dependence of metabolic fluxes and energy generation of Saccharomyces cerevisiae CEN.PK113-1A.

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30 November 2018

Metabolic model integration of the bibliome, genome, metabolome and reactome of Aspergillus niger

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30 November 2018

Hypoxic fed-batch cultivation of Pichia pastoris increases specific and volumetric productivity of recombinant proteins

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30 November 2018

Metabolic flux analysis using stoichiometric models for Aspergillus niger: comparison under glucoamylase-producing and non-producing conditions

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Physiological characterization of xylose metabolism in Aspergillus niger under oxygen-limited conditions

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30 November 2018

Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88

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30 November 2018

Polyol synthesis in Aspergillus niger: influence of oxygen availability, carbon and nitrogen sources on the metabolism

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30 November 2018

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1 reference

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30 November 2018

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Industrial glucoamylase fed-batch benefits from oxygen limitation and high osmolarity

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based on heuristic

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Global transcriptional response of Aspergillus niger in the process of glucoamylase fermentation

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1038/S41598-018-32341-1

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24 April 2020

1 reference

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24 April 2020

1 reference

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24 April 2020

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