(Q59161747)

English

Description of three new Peptoniphilus species cultured in the vaginal fluid of a woman diagnosed with bacterial vaginosis: Peptoniphilus pacaensis sp. nov., Peptoniphilus raoultii sp. nov., and Peptoniphilus vaginalis sp. nov

scientific article published on 21 June 2018

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scholarly article

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1 April 2020

Description of three new Peptoniphilus species cultured in the vaginal fluid of a woman diagnosed with bacterial vaginosis: Peptoniphilus pacaensis sp. nov., Peptoniphilus raoultii sp. nov., and Peptoniphilus vaginalis sp. nov (English)

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1 April 2020

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bacterial vaginosis

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based on heuristic

inferred from title

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Khoudia Diop

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1 April 2020

Pierre-Édouard Fournier

7

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1 April 2020

Florence Fenollar

8

object named as

Florence Fenollar

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1 April 2020

author name string

Awa Diop

2

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1 April 2020

Caroline Michelle

3

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1 April 2020

Magali Richez

4

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1 April 2020

Jaishriram Rathored

5

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1 April 2020

Florence Bretelle

6

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1 April 2020

publication date

21 June 2018

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1 April 2020

MicrobiologyOpen

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1 April 2020

8

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1 April 2020

3

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1 April 2020

e00661

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1 April 2020

Three new species of the genus Peptostreptococcus isolated from humans: Peptostreptococcus vaginalis sp. nov., Peptostreptococcus lacrimalis sp. nov., and Peptostreptococcus lactolyticus sp. nov

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evaluation of the E test for susceptibility testing of anaerobic bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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The clinical importance of gram-positive anaerobic cocci isolated at St Bartholomew's Hospital, London, in 1987

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Amelioration of bacterial genomes: rates of change and exchange

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phenotypic diversity among ruminal isolates of Prevotella ruminicola: proposal of Prevotella brevis sp. nov., Prevotella bryantii sp. nov., and Prevotella albensis sp. nov. and redefinition of Prevotella ruminicola

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gram-positive anaerobic cocci.

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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Proposal of the genera Anaerococcus gen. nov., Peptoniphilus gen. nov. and Gallicola gen. nov. for members of the genus Peptostreptococcus

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protective role of the Doderleïn flora

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A combined transmembrane topology and signal peptide prediction method

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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FIGENIX: intelligent automation of genomic annotation: expertise integration in a new software platform

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Association ofAtopobium vaginaeandGardnerella vaginaliswith Bacterial Vaginosis and Recurrence after Oral Metronidazole Therapy

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA-DNA hybridization values and their relationship to whole-genome sequence similarities

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNAmmer: consistent and rapid annotation of ribosomal RNA genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular Quantification ofGardnerella vaginalisandAtopobium vaginaeLoads to Predict Bacterial Vaginosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The human vaginal bacterial biota and bacterial vaginosis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ongoing revolution in bacteriology: routine identification of bacteria by matrix-assisted laser desorption ionization time-of-flight mass spectrometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PhyloPattern: regular expressions to identify complex patterns in phylogenetic trees

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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Shifting the genomic gold standard for the prokaryotic species definition

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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Prodigal: prokaryotic gene recognition and translation initiation site identification

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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Peptoniphilus methioninivorax sp. nov., a Gram-positive anaerobic coccus isolated from retail ground beef

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Peptoniphilus duerdenii sp. nov. and Peptoniphilus koenoeneniae sp. nov., isolated from human clinical specimens

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Importance of vaginal microbes in reproductive health

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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Genome sequence-based species delimitation with confidence intervals and improved distance functions

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Composition of the vaginal microbiota in women of reproductive age--sensitive and specific molecular diagnosis of bacterial vaginosis is possible?

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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Non contiguous-finished genome sequence and description of Peptoniphilus senegalensis sp. nov.

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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Development of the EUCAST disk diffusion antimicrobial susceptibility testing method and its implementation in routine microbiology laboratories

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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MEGA6: Molecular Evolutionary Genetics Analysis version 6.0

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Trimmomatic: a flexible trimmer for Illumina sequence data

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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Peptoniphilus stercorisuis sp. nov., isolated from a swine manure storage tank and description of Peptoniphilaceae fam. nov.

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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Complementarity between targeted real-time specific PCR and conventional broad-range 16S rDNA PCR in the syndrome-driven diagnosis of infectious diseases

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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Ezakiella peruensis gen. nov., sp. nov. isolated from human fecal sample from a coastal traditional community in Peru

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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The rebirth of culture in microbiology through the example of culturomics to study human gut microbiota

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

From culturomics to taxonomogenomics: A need to change the taxonomy of prokaryotes in clinical microbiology

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Human Microbiome during Bacterial Vaginosis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome sequence and description of Anaerosalibacter massiliensis sp. nov.

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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Bacterial Vaginosis and Pregnancy Outcome in Lagos, Nigeria

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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More Easily Cultivated Than Identified: Classical Isolation With Molecular Identification of Vaginal Bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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The Vaginal Microbiome: Current Understanding and Future Directions

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Culture of previously uncultured members of the human gut microbiota by culturomics

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

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Blautia massiliensis sp. nov., isolated from a fresh human fecal sample and emended description of the genus Blautia

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inediibacterium massiliense gen. nov., sp. nov., a new bacterial species isolated from the gut microbiota of a severely malnourished infant

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparison of culture-dependent and culture-independent molecular methods for characterization of vaginal microflora.

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes

1 reference

https://pubmed.ncbi.nlm.nih.gov/29931836

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1002/MBO3.661

1 reference

Europe PubMed Central

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1 April 2020

1 reference

Europe PubMed Central

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1 April 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29931836%20AND%20SRC:MED&resulttype=core&format=json

1 April 2020

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