(Q59360247)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29845524%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

title

Flaviviral RNA Structures and Their Role in Replication and Immunity (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29845524%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

0 references

1 reference

viral genome replication

1 reference

based on heuristic

inferred from abstract

author name string

Katell Bidet

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29845524%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

Mariano A Garcia-Blanco

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29845524%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

language of work or name

English

0 references

publication date

1 January 2018

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29845524%20AND%20SRC:MED&resulttype=core&format=json

Advances in Experimental Medicine and Biology

29 March 2020

number of pages

18

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29845524%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

volume

1062

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29845524%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

page(s)

45-62

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29845524%20AND%20SRC:MED&resulttype=core&format=json

Noncoding Subgenomic Flavivirus RNA Is Processed by the Mosquito RNA Interference Machinery and Determines West Nile Virus Transmission by Culex pipiens Mosquitoes

29 March 2020

cites work

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Identification of Proteins Bound to Dengue Viral RNA In Vivo Reveals New Host Proteins Important for Virus Replication.

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Specific requirements for elements of the 5' and 3' terminal regions in flavivirus RNA synthesis and viral replication

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Polypyrimidine tract-binding protein influences negative strand RNA synthesis of dengue virus

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A CRISPR screen defines a signal peptide processing pathway required by flaviviruses

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RIG-I mediates innate immune response in mouse neurons following Japanese encephalitis virus infection

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An RNA pseudoknot is required for production of yellow fever virus subgenomic RNA by the host nuclease XRN1

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Identification of RNA Binding Proteins Associated with Dengue Virus RNA in Infected Cells Reveals Temporally Distinct Host Factor Requirements

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West Nile virus encodes a microRNA-like small RNA in the 3' untranslated region which up-regulates GATA4 mRNA and facilitates virus replication in mosquito cells

1 November 2022

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Internally deleted WNV genomes isolated from exotic birds in New Mexico: function in cells, mosquitoes, and mice

1 November 2022

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West Nile virus noncoding subgenomic RNA contributes to viral evasion of the type I interferon-mediated antiviral response

1 November 2022

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West Nile Virus 5'-Cap Structure Is Formed by Sequential Guanine N-7 and Ribose 2'-O Methylations by Nonstructural Protein 5

1 November 2022

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RPLP1 and RPLP2 Are Essential Flavivirus Host Factors That Promote Early Viral Protein Accumulation

1 November 2022

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Essential role of RIG-I in the activation of endothelial cells by dengue virus

1 November 2022

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Dengue subgenomic flaviviral RNA disrupts immunity in mosquito salivary glands to increase virus transmission

1 November 2022

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Interplay of RNA elements in the dengue virus 5' and 3' ends required for viral RNA replication

1 November 2022

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2'-O methylation of the viral mRNA cap by West Nile virus evades ifit1-dependent and -independent mechanisms of host restriction in vivo

1 November 2022

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RNA elements within the 5' untranslated region of the West Nile virus genome are critical for RNA synthesis and virus replication

1 November 2022

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Viruses and microRNAs: RISCy interactions with serious consequences

1 November 2022

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A conserved predicted pseudoknot in the NS2A-encoding sequence of West Nile and Japanese encephalitis flaviviruses suggests NS1' may derive from ribosomal frameshifting

1 November 2022

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The flavivirus NS5 protein is a true RNA guanylyltransferase that catalyzes a two-step reaction to form the RNA cap structure

1 November 2022

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Structural complexity of Dengue virus untranslated regions: cis-acting RNA motifs and pseudoknot interactions modulating functionality of the viral genome

1 November 2022

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Inhibition of Japanese encephalitis virus replication by peptide nucleic acids targeting cis-acting elements on the plus- and minus-strands of viral RNA.

1 November 2022

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The endoplasmic reticulum provides the membrane platform for biogenesis of the flavivirus replication complex

1 November 2022

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Translational regulation by the 3' untranslated region of the dengue type 2 virus genome

1 November 2022

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In vitro RNA synthesis from exogenous dengue viral RNA templates requires long range interactions between 5'- and 3'-terminal regions that influence RNA structure

1 November 2022

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Detection of stable secondary structure at the 3′ terminus of dengue virus type 2 RNA

1 November 2022

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Dengue virus utilizes a novel strategy for translation initiation when cap-dependent translation is inhibited

1 November 2022

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The polypyrimidine tract-binding protein is required for efficient dengue virus propagation and associates with the viral replication machinery

1 November 2022

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Defective interfering viral particles in acute dengue infections

1 November 2022

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Flaviviral RNAs: weapons and targets in the war between virus and host

1 November 2022

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Overlapping local and long-range RNA-RNA interactions modulate dengue virus genome cyclization and replication

1 November 2022

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Role of human heterogeneous nuclear ribonucleoprotein C1/C2 in dengue virus replication

1 November 2022

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RNA structures required for production of subgenomic flavivirus RNA

1 November 2022

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Dengue Virus Nonstructural Protein 5 (NS5) Assembles into a Dimer with a Unique Methyltransferase and Polymerase Interface

1 November 2022

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A novel coding-region RNA element modulates infectious dengue virus particle production in both mammalian and mosquito cells and regulates viral replication in Aedes aegypti mosquitoes

1 November 2022

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P-body components LSM1, GW182, DDX3, DDX6 and XRN1 are recruited to WNV replication sites and positively regulate viral replication

1 November 2022

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Quantitative mass spectrometry of DENV-2 RNA-interacting proteins reveals that the DEAD-box RNA helicase DDX6 binds the DB1 and DB2 3' UTR structures

1 November 2022

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Human TLR3 recognizes dengue virus and modulates viral replication in vitro

1 November 2022

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Y box-binding protein-1 binds to the dengue virus 3'-untranslated region and mediates antiviral effects

1 November 2022

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Secondary structure of dengue virus type 4 3' untranslated region: impact of deletion and substitution mutations

1 November 2022

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Inhibition of dengue virus translation and RNA synthesis by a morpholino oligomer targeted to the top of the terminal 3' stem-loop structure

1 November 2022

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The topology of bulges in the long stem of the flavivirus 3' stem-loop is a major determinant of RNA replication competence.

1 November 2022

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La protein can simultaneously bind to both 3'- and 5'-noncoding regions of Japanese encephalitis virus genome

1 November 2022

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Full Genome Sequence and sfRNA Interferon Antagonist Activity of Zika Virus from Recife, Brazil

1 November 2022

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Viral RNA switch mediates the dynamic control of flavivirus replicase recruitment by genome cyclization

1 November 2022

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Mutation of Mapped TIA-1/TIAR Binding Sites in the 3' Terminal Stem-Loop of West Nile Virus Minus-Strand RNA in an Infectious Clone Negatively Affects Genomic RNA Amplification

1 November 2022

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MCPIP1 ribonuclease exhibits broad-spectrum antiviral effects through viral RNA binding and degradation

1 November 2022

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Genetic dissection of Flaviviridae host factors through genome-scale CRISPR screens

1 November 2022

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FUSE binding protein 1 interacts with untranslated regions of Japanese encephalitis virus RNA and negatively regulates viral replication

1 November 2022

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The capsid-coding region hairpin element (cHP) is a critical determinant of dengue virus and West Nile virus RNA synthesis

1 November 2022

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Flavivirus sfRNA suppresses antiviral RNA interference in cultured cells and mosquitoes and directly interacts with the RNAi machinery

1 November 2022

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Novel cis-acting element within the capsid-coding region enhances flavivirus viral-RNA replication by regulating genome cyclization

1 November 2022

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Japanese encephalitis virus non-coding RNA inhibits activation of interferon by blocking nuclear translocation of interferon regulatory factor 3.

1 November 2022

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Detection and sequencing of defective viral genomes in C6/36 cells persistently infected with dengue virus 2.

1 November 2022

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Functional RNA elements in the dengue virus genome

1 November 2022

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RNA Secondary Structure in the Coding Region of Dengue Virus Type 2 Directs Translation Start Codon Selection and Is Required for Viral Replication

1 November 2022

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Identification and characterization of small sub-genomic RNAs in dengue 1-4 virus-infected cell cultures and tissues

1 November 2022

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Terminal structures of West Nile virus genomic RNA and their interactions with viral NS5 protein

1 November 2022

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Functional analysis of dengue virus cyclization sequences located at the 5' and 3'UTRs

1 November 2022

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RNA sequences and structures required for the recruitment and activity of the dengue virus polymerase

1 November 2022

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A novel in vitro replication system for Dengue virus. Initiation of RNA synthesis at the 3'-end of exogenous viral RNA templates requires 5'- and 3'-terminal complementary sequence motifs of the viral RNA.

1 November 2022

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The 3' stem loop of the West Nile virus genomic RNA can suppress translation of chimeric mRNAs

1 November 2022

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Discovery of insect and human dengue virus host factors

1 November 2022

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Identification of Zika Virus and Dengue Virus Dependency Factors using Functional Genomics

1 November 2022

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NF90 binds the dengue virus RNA 3' terminus and is a positive regulator of dengue virus replication

1 November 2022

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Dengue virus RNA structure specialization facilitates host adaptation

1 November 2022

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Heterogeneous nuclear ribonucleoprotein A2 participates in the replication of Japanese encephalitis virus through an interaction with viral proteins and RNA.

1 November 2022

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Dengue subgenomic RNA binds TRIM25 to inhibit interferon expression for epidemiological fitness

1 November 2022

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Structure Determination of the Top-Loop of the Conserved 3′-Terminal Secondary Structure in the Genome of Flaviviruses

1 November 2022

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The Golgi associated ERI3 is a Flavivirus host factor

1 November 2022

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Essential role of cyclization sequences in flavivirus RNA replication

1 November 2022

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A Single Amino Acid Substitution in the West Nile Virus Nonstructural Protein NS2A Disables Its Ability To Inhibit Alpha/Beta Interferon Induction and Attenuates Virus Virulence in Mice

1 November 2022

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RNase L plays a role in the antiviral response to West Nile virus

1 November 2022

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Zika virus produces noncoding RNAs using a multi-pseudoknot structure that confounds a cellular exonuclease

1 November 2022

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Rational design of a flavivirus vaccine by abolishing viral RNA 2'-O methylation

1 November 2022

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RNA interference screen for human genes associated with West Nile virus infection

1 November 2022

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G protein-coupled receptor kinase 2 promotes flaviviridae entry and replication

1 November 2022

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Three-dimensional architecture of tick-borne encephalitis virus replication sites and trafficking of the replicated RNA.

1 November 2022

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Flavivirus RNA transactions from viral entry to genome replication

1 November 2022

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Differential RNA sequence requirement for dengue virus replication in mosquito and mammalian cells

1 November 2022

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Long-Range RNA-RNA Interactions Circularize the Dengue Virus Genome

1 November 2022

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Dephosphorylation of West Nile virus capsid protein enhances the processes of nucleocapsid assembly.

1 November 2022

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Spatial and temporal organization of tick-borne encephalitis flavivirus replicated RNA in living cells

1 November 2022

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Characterization of the elongation complex of dengue virus RNA polymerase: assembly, kinetics of nucleotide incorporation, and fidelity

1 November 2022

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Enhancement of dengue virus translation: role of the 3' untranslated region and the terminal 3' stem-loop domain

1 November 2022

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La protein binds to NS5 and NS3 and to the 5' and 3' ends of Dengue 4 virus RNA.

1 November 2022

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Activation of Toll-like receptor 3 impairs the dengue virus serotype 2 replication through induction of IFN-β in cultured hepatoma cells

1 November 2022

1 reference

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La protein binds the predicted loop structures in the 3' non-coding region of Japanese encephalitis virus genome: role in virus replication

1 November 2022

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Formation of membrane-defined compartments by tick-borne encephalitis virus contributes to the early delay in interferon signaling.

1 November 2022

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Functional interaction between cellular p100 and the dengue virus 3' UTR.

1 November 2022

1 reference

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Poly(A)-binding protein binds to the non-polyadenylated 3' untranslated region of dengue virus and modulates translation efficiency

1 November 2022

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https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

West Nile virus-induced cytoplasmic membrane structures provide partial protection against the interferon-induced antiviral MxA protein

1 November 2022

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https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

Role of RNA structures present at the 3'UTR of dengue virus on translation, RNA synthesis, and viral replication

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

Coupling between replication and packaging of flavivirus RNA: evidence derived from the use of DNA-based full-length cDNA clones of Kunjin virus

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

Interaction between the Cellular Protein eEF1A and the 3'-Terminal Stem-Loop of West Nile Virus Genomic RNA Facilitates Viral Minus-Strand RNA Synthesis

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

Structural and Functional Studies of the Promoter Element for Dengue Virus RNA Replication

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

Conformational Changes in the Solution Structure of the Dengue Virus 5' End in the Presence and Absence of the 3' Untranslated Region

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

NS1' of Flaviviruses in the Japanese Encephalitis Virus Serogroup Is a Product of Ribosomal Frameshifting and Plays a Role in Viral Neuroinvasiveness

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

Six RNA Viruses and Forty-One Hosts: Viral Small RNAs and Modulation of Small RNA Repertoires in Vertebrate and Invertebrate Systems

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

The Structural Basis of Pathogenic Subgenomic Flavivirus RNA (sfRNA) Production

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

2'-O methylation of the viral mRNA cap evades host restriction by IFIT family members

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

G3BP1, G3BP2 and CAPRIN1 are required for translation of interferon stimulated mRNAs and are targeted by a dengue virus non-coding RNA.

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

A Highly Structured, Nuclease-Resistant, Noncoding RNA Produced by Flaviviruses Is Required for Pathogenicity

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

Cell proteins TIA-1 and TIAR interact with the 3' stem-loop of the West Nile virus complementary minus-strand RNA and facilitate virus replication

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

RIG-I, MDA5 and TLR3 synergistically play an important role in restriction of dengue virus infection

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

A noncoding RNA produced by arthropod-borne flaviviruses inhibits the cellular exoribonuclease XRN1 and alters host mRNA stability

1 November 2022

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Defective viral genomes arising in vivo provide critical danger signals for the triggering of lung antiviral immunity

1 November 2022

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N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection

1 November 2022

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Toll-Like Receptor 3 Has a Protective Role against West Nile Virus Infection

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

Dengue Virus Type 2 Infections of Aedes aegypti Are Modulated by the Mosquito's RNA Interference Pathway

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

Vir-Mir db: prediction of viral microRNA candidate hairpins.

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

eIF3d is an mRNA cap-binding protein that is required for specialized translation initiation

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

Dengue virus genomic variation associated with mosquito adaptation defines the pattern of viral non-coding RNAs and fitness in human cells

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

RNA structures that resist degradation by Xrn1 produce a pathogenic Dengue virus RNA

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

Noncoding flavivirus RNA displays RNA interference suppressor activity in insect and Mammalian cells

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

Dengue virus subgenomic RNA induces apoptosis through the Bcl-2-mediated PI3k/Akt signaling pathway

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

Structure and function of the 3' terminal six nucleotides of the west nile virus genome in viral replication

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

LSm1 binds to the Dengue virus RNA 3' UTR and is a positive regulator of Dengue virus replication.

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

Ultrastructure of Kunjin virus-infected cells: colocalization of NS1 and NS3 with double-stranded RNA, and of NS2B with NS3, in virus-induced membrane structures

1 November 2022

1 reference

https://api.crossref.org/works/10.1007/978-981-10-8727-1_4

10.1007/978-981-10-8727-1_4

1 November 2022

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29845524%20AND%20SRC:MED&resulttype=core&format=json

29 March 2020

1 reference