(Q60167432)

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Why are the low-energy protein normal modes evolutionarily conserved?

article published in 2012

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title

Why are the low-energy protein normal modes evolutionarily conserved? (English)

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Julian Echave

1

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publication date

30 June 2012

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number of pages

7

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published in

Pure and Applied Chemistry

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volume

84

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issue

9

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page(s)

1931-1937

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cites work

Accurate and efficient description of protein vibrational dynamics: comparing molecular dynamics and Gaussian models

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Large‐scale comparison of protein essential dynamics from molecular dynamics simulations and coarse‐grained normal mode analyses

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20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Global dynamics of proteins: bridging between structure and function

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Flexibility and enzymatic cold-adaptation: A comparative molecular dynamics investigation of the elastase family

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Comparative molecular dynamics--similar folds and similar motions?

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

On the conservation of the slow conformational dynamics within the amino acid kinase family: NAGK the paradigm

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Dynamics based alignment of proteins: an alternative approach to quantify dynamic similarity

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Thorough Validation of Protein Normal Mode Analysis: A Comparative Study with Essential Dynamics

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Nonadiabatic Calculation of Dipole Moments

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Evolutionary conservation of protein vibrational dynamics

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Exploring the factors determining the dynamics of different protein folds

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Harmonicity in slow protein dynamics

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Deciphering the deformation modes associated with function retention and specialization in members of the Ras superfamily.

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Convergent dynamics in the protease enzymatic superfamily

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Exploring the common dynamics of homologous proteins. Application to the globin family.

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Correspondences between low-energy modes in enzymes: dynamics-based alignment of enzymatic functional families

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20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

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https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

SCOP: a structural classification of proteins database

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Evolutionary divergence of protein structure: The linearly forced elastic network model

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

Evolutionary conservation of protein backbone flexibility.

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/references/10.1351/PAC-CON-12-02-15

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DOI

10.1351/PAC-CON-12-02-15

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(Q60167432)

Why are the low-energy protein normal modes evolutionarily conserved?

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