(Q60922210)

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Genetic Evidence for Two Carbon Fixation Pathways (the Calvin-Benson-Bassham Cycle and the Reverse Tricarboxylic Acid Cycle) in Symbiotic and Free-Living Bacteria

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30602523%20AND%20SRC:MED&resulttype=core&format=json

16 April 2020

Genetic Evidence for Two Carbon Fixation Pathways (the Calvin-Benson-Bassham Cycle and the Reverse Tricarboxylic Acid Cycle) in Symbiotic and Free-Living Bacteria (English)

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30602523%20AND%20SRC:MED&resulttype=core&format=json

16 April 2020

carbon fixation

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Maxim Rubin-Blum

1

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30602523%20AND%20SRC:MED&resulttype=core&format=json

16 April 2020

Nicole Dubilier

2

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16 April 2020

3

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16 April 2020

Nicole Dubilier

2

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Nicole Dubilier

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Maxim Rubin-Blum

1

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Manuel Kleiner

3

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2 January 2019

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16 April 2020

1 reference

Europe PubMed Central

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16 April 2020

4

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Europe PubMed Central

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16 April 2020

1

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30602523%20AND%20SRC:MED&resulttype=core&format=json

16 April 2020

Thiol:fumarate reductase (Tfr) from Methanobacterium thermoautotrophicum--identification of the catalytic sites for fumarate reduction and thiol oxidation

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

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MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

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Physiological proteomics of the uncultured endosymbiont of Riftia pachyptila

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metabolic versatility of the Riftia pachyptila endosymbiont revealed through metagenomics

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NCBI BLAST: a better web interface

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metagenomic islands of hyperhalophiles: the case of Salinibacter ruber

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bacterial Na+-translocating ferredoxin:NAD+ oxidoreductase

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Beyond the Calvin cycle: autotrophic carbon fixation in the ocean

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Status quo in physiological proteomics of the uncultured Riftia pachyptila endosymbiont

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Carboxylases in natural and synthetic microbial pathways

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Physiological homogeneity among the endosymbionts of Riftia pachyptila and Tevnia jerichonana revealed by proteogenomics

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phylogenomic analysis of bacterial and archaeal sequences with AMPHORA2.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metaproteomics of a gutless marine worm and its symbiotic microbial community reveal unusual pathways for carbon and energy use.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Convergent and divergent evolution of metabolism in sulfur-oxidizing symbionts and the role of horizontal gene transfer

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Widespread occurrence of two carbon fixation pathways in tubeworm endosymbionts: lessons from hydrothermal vent associated tubeworms from the mediterranean sea

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Giant tubeworms

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sulfide oxidation, nitrate respiration, carbon acquisition, and electron transport pathways suggested by the draft genome of a single orange Guaymas Basin Beggiatoa (Cand. Maribeggiatoa) sp. filament.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The FlxABCD-HdrABC proteins correspond to a novel NADH dehydrogenase/heterodisulfide reductase widespread in anaerobic bacteria and involved in ethanol metabolism in Desulfovibrio vulgaris Hildenborough.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Assessment of the stoichiometry and efficiency of CO2 fixation coupled to reduced sulfur oxidation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NADPH-generating systems in bacteria and archaea

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Single-Cell (Meta-)Genomics of a Dimorphic Candidatus Thiomargarita nelsonii Reveals Genomic Plasticity

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Single-cell Sequencing of Thiomargarita Reveals Genomic Flexibility for Adaptation to Dynamic Redox Conditions.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Thousands of microbial genomes shed light on interconnected biogeochemical processes in an aquifer system.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Dark Side of the Mushroom Spring Microbial Mat: Life in the Shadow of Chlorophototrophs. II. Metabolic Functions of Abundant Community Members Predicted from Metagenomic Analyses

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metagenomics-guided analysis of microbial chemolithoautotrophic phosphite oxidation yields evidence of a seventh natural CO2 fixation pathway

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metagenomic investigation of vestimentiferan tubeworm endosymbionts from Mid-Cayman Rise reveals new insights into metabolism and diversity.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A primordial and reversible TCA cycle in a facultatively chemolithoautotrophic thermophile.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reversibility of citrate synthase allows autotrophic growth of a thermophilic bacterium.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30602523

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MSPHERE.00394-18

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30602523%20AND%20SRC:MED&resulttype=core&format=json

16 April 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30602523%20AND%20SRC:MED&resulttype=core&format=json

16 April 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30602523%20AND%20SRC:MED&resulttype=core&format=json

16 April 2020

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