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SIRIUS 4: a rapid tool for turning tandem mass spectra into metabolite structure information
scientific article published on 18 March 2019
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scholarly article
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Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
title
SIRIUS 4: a rapid tool for turning tandem mass spectra into metabolite structure information
(English)
1 reference
stated in
Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
main subject
biotechnology
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author
Kai Dührkop
series ordinal
1
1 reference
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Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
Markus Fleischauer
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2
1 reference
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Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
Marcus Ludwig
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3
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Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
Alexander Aksenov
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4
1 reference
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Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
Alexey V Melnik
series ordinal
5
1 reference
stated in
Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
Pieter C. Dorrestein
series ordinal
7
1 reference
stated in
Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
Juho Rousu
series ordinal
8
1 reference
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Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
Sebastian Böcker
series ordinal
9
1 reference
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Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
Marvin Meusel
series ordinal
6
object named as
Marvin Meusel
1 reference
stated in
Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
publication date
18 March 2019
1 reference
stated in
Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
published in
Nature Methods
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Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
volume
16
1 reference
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Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
page(s)
299-302
1 reference
stated in
Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
issue
4
1 reference
stated in
Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
exact match
https://scigraph.springernature.com/pub.10.1038/s41592-019-0344-8
0 references
cites work
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking
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7 January 2021
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MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis
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MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
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7 January 2021
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XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification
1 reference
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Crossref
reference URL
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7 January 2021
based on heuristic
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SIRIUS: decomposing isotope patterns for metabolite identification
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FS41592-019-0344-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Towards de novo identification of metabolites by analyzing tandem mass spectra
1 reference
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Crossref
reference URL
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7 January 2021
based on heuristic
inferred from DOI database lookup
Fragmentation trees reloaded
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FS41592-019-0344-8
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7 January 2021
based on heuristic
inferred from DOI database lookup
Searching molecular structure databases with tandem mass spectra using CSI:FingerID.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FS41592-019-0344-8
retrieved
7 January 2021
based on heuristic
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Metabolite identification through multiple kernel learning on fragmentation trees
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FS41592-019-0344-8
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7 January 2021
based on heuristic
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Metabolite identification and molecular fingerprint prediction through machine learning.
1 reference
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Crossref
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https://api.crossref.org/works/10.1038%2FS41592-019-0344-8
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7 January 2021
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Revealing disease-associated pathways by network integration of untargeted metabolomics.
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Exploring the diversity of complex metabolic networks.
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7 January 2021
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Predicting the Presence of Uncommon Elements in Unknown Biomolecules from Isotope Patterns.
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7 January 2021
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Bayesian networks for mass spectrometric metabolite identification via molecular fingerprints.
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Crossref
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7 January 2021
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7 January 2021
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MINEs: open access databases of computationally predicted enzyme promiscuity products for untargeted metabolomics
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7 January 2021
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Critical Assessment of Small Molecule Identification 2016: automated methods
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Finding maximum colorful subtrees in practice
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Speedy Colorful Subtrees
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7 January 2021
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Highly accurate chemical formula prediction tool utilizing high-resolution mass spectra, MS/MS fragmentation, heuristic rules, and isotope pattern matching.
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7 January 2021
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Molecular Formula Identification Using Isotope Pattern Analysis and Calculation of Fragmentation Trees
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The Chemistry Development Kit (CDK) v2.0: atom typing, depiction, molecular formulas, and substructure searching
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Q63367548
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FS41592-019-0344-8
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The Chemistry Development Kit (CDK): an open-source Java library for Chemo- and Bioinformatics
1 reference
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Crossref
reference URL
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7 January 2021
based on heuristic
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Identifiers
DOI
10.1038/S41592-019-0344-8
1 reference
stated in
Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
Dimensions Publication ID
1112858205
0 references
PubMed ID
30886413
1 reference
stated in
Europe PubMed Central
PubMed ID
30886413
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30886413%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 April 2020
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