(Q63640425)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21775496%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

title

Intracompartmental and intercompartmental transcriptional networks coordinate the expression of genes for organellar functions (English)

1 reference

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8 February 2020

1

1 reference

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8 February 2020

Klaus Mayer

4

1 reference

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8 February 2020

author name string

Xi Wang

2

1 reference

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8 February 2020

Georg Haberer

3

1 reference

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8 February 2020

Tatjana Kleine

5

1 reference

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8 February 2020

language of work or name

English

0 references

publication date

20 July 2011

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8 February 2020

number of pages

19

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inferred from page(s)

published in

Plant Physiology

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8 February 2020

volume

157

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21775496%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

issue

1

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8 February 2020

page(s)

386-404

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Profiling ethylene-regulated gene expression in Arabidopsis thaliana by microarray analysis

8 February 2020

cites work

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12 December 2020

Genomics-based dissection of the cross-talk of chloroplasts with the nucleus and mitochondria in Arabidopsis

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12 December 2020

Chloroplast redox signals: how photosynthesis controls its own genes

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12 December 2020

The zinc-finger protein Zat12 plays a central role in reactive oxygen and abiotic stress signaling in Arabidopsis

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12 December 2020

High diversity of plastidial promoters in Arabidopsis thaliana.

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12 December 2020

Two binding sites for the plant transcription factor ASF-1 can respond to auxin treatments in transgenic tobacco

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12 December 2020

Plastid signalling to the nucleus and beyond.

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12 December 2020

The dynamics of photosynthesis.

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12 December 2020

Plastid signals remodel light signaling networks and are essential for efficient chloroplast biogenesis in Arabidopsis

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12 December 2020

Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize

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12 December 2020

Two-component systems in plant signal transduction

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12 December 2020

MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes

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12 December 2020

Sugar sensing and signaling in plants: conserved and novel mechanisms

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12 December 2020

Transcript levels in plant mitochondria show a tight homeostasis during day and night

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12 December 2020

Genome-wide analysis of Arabidopsis responsive transcriptome to nitrogen limitation and its regulation by the ubiquitin ligase gene NLA

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12 December 2020

Function of plastid sigma factors in higher plants: regulation of gene expression or just preservation of constitutive transcription?

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12 December 2020

Molecular Structure of the GARP Family of Plant Myb-Related DNA Binding Motifs of the Arabidopsis Response Regulators

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12 December 2020

Arabidopsis ABA INSENSITIVE4 regulates lipid mobilization in the embryo and reveals repression of seed germination by the endosperm.

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12 December 2020

Targeting of nucleus-encoded proteins to chloroplasts in plants

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12 December 2020

Arabidopsis STN7 kinase provides a link between short- and long-term photosynthetic acclimation

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12 December 2020

The two RNA polymerases encoded by the nuclear and the plastid compartments transcribe distinct groups of genes in tobacco plastids

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12 December 2020

Differential expression of the Arabidopsis cytochrome c genes Cytc-1 and Cytc-2. Evidence for the involvement of TCP-domain protein-binding elements in anther- and meristem-specific expression of the Cytc-1 gene

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12 December 2020

Nuclear-chloroplast signalling

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12 December 2020

Photosystem II core phosphorylation and photosynthetic acclimation require two different protein kinases

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12 December 2020

Mutation of either G box or I box sequences profoundly affects expression from the Arabidopsis rbcS-1A promoter

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12 December 2020

Signaling pathways from the chloroplast to the nucleus

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12 December 2020

Translational regulations as specific traits of chloroplast gene expression

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12 December 2020

Molecular genetic analysis of chloroplast gene promoters dependent on SIG2, a nucleus-encoded sigma factor for the plastid-encoded RNA polymerase, in Arabidopsis thaliana.

1 reference

12 December 2020

Cytonuclear coevolution: the genomics of cooperation

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12 December 2020

Chloroplast RNA metabolism

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12 December 2020

Induction of the AOX1D isoform of alternative oxidase in A. thaliana T-DNA insertion lines lacking isoform AOX1A is insufficient to optimize photosynthesis when treated with antimycin A.

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12 December 2020

Arabidopsis genomes uncoupled 5 (GUN5) mutant reveals the involvement of Mg-chelatase H subunit in plastid-to-nucleus signal transduction

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12 December 2020

Reactive oxygen species: metabolism, oxidative stress, and signal transduction

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12 December 2020

Differential gene expression profiles of the mitochondrial respiratory components in illuminated Arabidopsis leaves

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12 December 2020

Plant hormone signaling lightens up: integrators of light and hormones

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12 December 2020

TRANSFAC: a database on transcription factors and their DNA binding sites

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12 December 2020

Construction of a chloroplast protein interaction network and functional mining of photosynthetic proteins in Arabidopsis thaliana.

1 reference

12 December 2020

Analysis of 101 nuclear transcriptomes reveals 23 distinct regulons and their relationship to metabolism, chromosomal gene distribution and co-ordination of nuclear and plastid gene expression

1 reference

12 December 2020

Functional analysis of each blue light receptor, cry1, cry2, phot1, and phot2, by using combinatorial multiple mutants in Arabidopsis

1 reference

12 December 2020

HYPOSENSITIVE TO LIGHT, an Alpha/Beta Fold Protein, Acts Downstream of ELONGATED HYPOCOTYL 5 to Regulate Seedling De-Etiolation

1 reference

12 December 2020

Light regulation of the Arabidopsis respiratory chain. Multiple discrete photoreceptor responses contribute to induction of type II NAD(P)H dehydrogenase genes

1 reference

12 December 2020

Molecular interactions between light and hormone signaling to control plant growth

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12 December 2020

Signal transduction mutants of arabidopsis uncouple nuclear CAB and RBCS gene expression from chloroplast development

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12 December 2020

Systemic and intracellular responses to photooxidative stress in Arabidopsis

1 reference

12 December 2020

Coordination of gene expression between organellar and nuclear genomes

1 reference

12 December 2020

Common sets of promoter elements determine the expression characteristics of three Arabidopsis genes encoding isoforms of mitochondrial cytochrome c oxidase subunit 6b.

1 reference

12 December 2020

Dynamic plastid redox signals integrate gene expression and metabolism to induce distinct metabolic states in photosynthetic acclimation in Arabidopsis

1 reference

12 December 2020

The transcription machineries of plant mitochondria and chloroplasts: Composition, function, and regulation.

1 reference

12 December 2020

Co-regulation of nuclear genes encoding plastid ribosomal proteins by light and plastid signals during seedling development in tobacco and Arabidopsis

1 reference

12 December 2020

New candidate genes for heat resistance in Drosophila melanogaster are regulated by HSF.

1 reference

12 December 2020

[Ontogenetic changes in the photosynthetic apparatus and effect of cytokinins]

1 reference

12 December 2020

DNA transfer from organelles to the nucleus: the idiosyncratic genetics of endosymbiosis

1 reference

12 December 2020

1 reference

12 December 2020

Identification of Arabidopsis genes regulated by high light-stress using cDNA microarray

1 reference

12 December 2020

Influence of chloroplastic photo-oxidative stress on mitochondrial alternative oxidase capacity and respiratory properties: a case study with Arabidopsis yellow variegated 2.

1 reference

12 December 2020

Participation of nuclear genes in chloroplast gene expression

1 reference

12 December 2020

Studies on reactions of illuminated chloroplasts. I. Mechanism of the reduction of oxygen and other Hill reagents

1 reference

12 December 2020

SUBA: the Arabidopsis Subcellular Database.

1 reference

12 December 2020

The mitochondrial proteome database: MitoP2.

1 reference

12 December 2020

Cross-talk between singlet oxygen- and hydrogen peroxide-dependent signaling of stress responses in Arabidopsis thaliana

1 reference

12 December 2020

Role and regulation of plastid sigma factors and their functional interactors during chloroplast transcription - recent lessons from Arabidopsis thaliana

1 reference

12 December 2020

Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes

1 reference

12 December 2020

The Mg-chelatase H subunit is an abscisic acid receptor

1 reference

12 December 2020

Use of SAGE technology to reveal changes in gene expression in Arabidopsis leaves undergoing cold stress

1 reference

12 December 2020

Integration of light and plastid signals

1 reference

12 December 2020

Identification of regulatory elements involved in expression and induction by sucrose and UV-B light of the Arabidopsis thaliana COX5b-2 gene, encoding an isoform of cytochrome c oxidase subunit 5b.

1 reference

12 December 2020

Cluster analysis and comparison of various chloroplast transcriptomes and genes in Arabidopsis thaliana.

1 reference

12 December 2020

Plastid signalling to the nucleus: messengers still lost in the mists?

1 reference

12 December 2020

Photosynthesis and drought: can we make metabolic connections from available data?

1 reference

12 December 2020

Maize ABI4 binds coupling element1 in abscisic acid and sugar response genes

1 reference

12 December 2020

The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.

1 reference

12 December 2020

Coordination of nuclear and mitochondrial genome expression during mitochondrial biogenesis in Arabidopsis

1 reference

12 December 2020

(1)O2-mediated retrograde signaling during late embryogenesis predetermines plastid differentiation in seedlings by recruiting abscisic acid.

1 reference

12 December 2020

Endosymbiotic gene transfer: organelle genomes forge eukaryotic chromosomes

1 reference

12 December 2020

Dual temporal role of plastid sigma factor 6 in Arabidopsis development.

1 reference

12 December 2020

Coordination of plastid and nuclear gene expression.

1 reference

12 December 2020

Top-down phenomics of Arabidopsis thaliana: metabolic profiling by one- and two-dimensional nuclear magnetic resonance spectroscopy and transcriptome analysis of albino mutants

1 reference

12 December 2020

Human mitochondrial transcription revisited: only TFAM and TFB2M are required for transcription of the mitochondrial genes in vitro

1 reference

12 December 2020

FLU: a negative regulator of chlorophyll biosynthesis in Arabidopsis thaliana

1 reference

12 December 2020

Light-dependent gene expression for proteins in the respiratory chain of potato leaves.

1 reference

12 December 2020

Novel conserved sequence motifs in plant G-box binding proteins and implications for interactive domains

1 reference

12 December 2020

Covariations in the nuclear chloroplast transcriptome reveal a regulatory master-switch.

1 reference

12 December 2020

Plastid-to-nucleus retrograde signaling

1 reference

12 December 2020

Posttranscriptional control of chloroplast gene expression. From RNA to photosynthetic complex

1 reference

12 December 2020

A nuclear-encoded sigma factor, Arabidopsis SIG6, recognizes sigma-70 type chloroplast promoters and regulates early chloroplast development in cotyledons.

1 reference

12 December 2020

Beneficial interactions of mitochondrial metabolism with photosynthetic carbon assimilation.

1 reference

12 December 2020

Characterization of transformed Arabidopsis with altered alternative oxidase levels and analysis of effects on reactive oxygen species in tissue.

1 reference

12 December 2020

Signals from chloroplasts converge to regulate nuclear gene expression

1 reference

12 December 2020

Genome-wide analysis of hydrogen peroxide-regulated gene expression in Arabidopsis reveals a high light-induced transcriptional cluster involved in anthocyanin biosynthesis

1 reference

12 December 2020

Energy biogenesis: one key for coordinating two genomes

1 reference

12 December 2020

Transcription factor and microRNA motif discovery: the Amadeus platform and a compendium of metazoan target sets

1 reference

12 December 2020

The transcription factor ABI4 is a regulator of mitochondrial retrograde expression of ALTERNATIVE OXIDASE1a.

1 reference

12 December 2020

Mitochondrial retrograde regulation in plants

1 reference

12 December 2020

Mitochondrial retrograde signaling

1 reference

12 December 2020

Pathways of intracellular communication: tetrapyrroles and plastid-to-nucleus signaling

1 reference

12 December 2020

Regulatory functions of nuclear hexokinase1 complex in glucose signaling

1 reference

12 December 2020

Insights into the survival of Chlamydomonas reinhardtii during sulfur starvation based on microarray analysis of gene expression

1 reference

12 December 2020

Rapid induction of distinct stress responses after the release of singlet oxygen in Arabidopsis

1 reference

12 December 2020

Photooxidative destruction of chloroplasts and its consequences for expression of nuclear genes

1 reference

12 December 2020

Involvement of maize Dof zinc finger proteins in tissue-specific and light-regulated gene expression

1 reference

12 December 2020

Plastid signals that affect photomorphogenesis in Arabidopsis thaliana are dependent on GENOMES UNCOUPLED 1 and cryptochrome 1

1 reference

12 December 2020

Pvclust: an R package for assessing the uncertainty in hierarchical clustering.

1 reference

12 December 2020

PHOSPHATE TRANSLOCATORS IN PLASTIDS.

1 reference

12 December 2020