(Q84529034)

English

Dynamic plastid redox signals integrate gene expression and metabolism to induce distinct metabolic states in photosynthetic acclimation in Arabidopsis

scientific article published on 08 September 2009

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7 February 2020

Dynamic plastid redox signals integrate gene expression and metabolism to induce distinct metabolic states in photosynthetic acclimation in Arabidopsis (English)

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7 February 2020

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7 February 2020

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7 February 2020

Peter Geigenberger

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7 February 2020

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7 February 2020

Alisdair R Fernie

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Alisdair R Fernie

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7 February 2020

Adriano Nunes Nesi

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Adriano Nunes-Nesi

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7 February 2020

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Markus Wirtz

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7 February 2020

Thomas Pfannschmidt

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Thomas Pfannschmidt

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7 February 2020

author name string

Katharina Bräutigam

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7 February 2020

Tatjana Kleine

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7 February 2020

Elke Ströher

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7 February 2020

Dennis Wormuth

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7 February 2020

Karl-Josef Dietz

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7 February 2020

Dörte Radke

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7 February 2020

Peter Dörmann

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7 February 2020

Nicolas Schauer

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7 February 2020

Sandra N Oliver

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7 February 2020

publication date

8 September 2009

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7 February 2020

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7 February 2020

21

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7 February 2020

9

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7 February 2020

2715-2732

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7 February 2020

Chloroplast redox signals: how photosynthesis controls its own genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Glutathione, photosynthesis and the redox regulation of stress-responsive gene expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Redox homeostasis and antioxidant signaling: a metabolic interface between stress perception and physiological responses

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plastid signalling to the nucleus and beyond.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The dynamics of photosynthesis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plastid signals remodel light signaling networks and are essential for efficient chloroplast biogenesis in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

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Trehalose 6-phosphate regulates starch synthesis via posttranslational redox activation of ADP-glucose pyrophosphorylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

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MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

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The effect of dihydroxyacetone phosphate and 3-phosphoglycerate on O2 evolution and on the levels of ATP, ADP and Pi in isolated intact chloroplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

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Cytosolic ascorbate peroxidase 1 is a central component of the reactive oxygen gene network of Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Redox control, redox signaling, and redox homeostasis in plant cells.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

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Chlororespiration and grana hyperstacking: how an Arabidopsis double mutant can survive despite defects in starch biosynthesis and daily carbon export from chloroplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

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Integration of metabolite with transcript and enzyme activity profiling during diurnal cycles in Arabidopsis rosettes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phytochromes and light signal perception by plants--an emerging synthesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

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Towards an understanding of photosynthetic acclimation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence that the plastid signal and light operate via the same cis-acting elements in the promoters of nuclear genes for plastid proteins.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Short- and long-term redox regulation of photosynthetic light energy distribution and photosystem stoichiometry by acetate metabolism in the green alga, Chlamydobotrys stellata.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

GLK transcription factors coordinate expression of the photosynthetic apparatus in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The phytochrome-interacting transcription factor, PIF3, acts early, selectively, and positively in light-induced chloroplast development

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Photosystem II core phosphorylation and photosynthetic acclimation require two different protein kinases

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

O-acetylserine (thiol) lyase: an enigmatic enzyme of plant cysteine biosynthesis revisited in Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Acclimation of Arabidopsis thaliana to the light environment: the role of photoreceptors

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The ferredoxin/thioredoxin system of oxygenic photosynthesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The role of phosphorylation in redox regulation of photosynthesis genes psaA and psbA during photosynthetic acclimation of mustard.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Construction and maintenance of the optimal photosynthetic systems of the leaf, herbaceous plant and tree: an eco-developmental treatise

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The plastid sigma factor SIG1 maintains photosystem I activity via regulated expression of the psaA operon in rice chloroplasts.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Potential regulation of gene expression in photosynthetic cells by redox and energy state: approaches towards better understanding

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Role of thylakoid protein kinases in photosynthetic acclimation

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Redox control of psbA gene expression in the cyanobacterium Synechocystis PCC 6803. Involvement of the cytochrome b(6)/f complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of gene expression by photosynthetic signals triggered through modified CO2 availability

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of the chloroplast protein kinase Stt7 during state transitions

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sugar and ABA response pathways and the control of gene expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Translation of chloroplast psbA mRNA is regulated by signals initiated by both photosystems II and I

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ferredoxin-1 mRNA is destabilized by changes in photosynthetic electron transport

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chloroplast-mediated regulation of nuclear genes in Arabidopsis thaliana in the absence of light stress

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reactive oxygen species: metabolism, oxidative stress, and signal transduction

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene-sequence-tag expression analyses of 1,800 genes related to chloroplast functions

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

State transitions and light adaptation require chloroplast thylakoid protein kinase STN7

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Translation of chloroplast psbA mRNA is modulated in the light by counteracting oxidizing and reducing activities

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of 101 nuclear transcriptomes reveals 23 distinct regulons and their relationship to metabolism, chromosomal gene distribution and co-ordination of nuclear and plastid gene expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Signal transduction mutants of Arabidopsis uncouple nuclear CAB and RBCS gene expression from chloroplast development

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bioconductor: open software development for computational biology and bioinformatics

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of far-red light-regulated genome expression profiles of phytochrome A pathway mutants in Arabidopsis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Polyribosome loading of spinach mRNAs for photosystem I subunits is controlled by photosynthetic electron transport

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Combined transcript and metabolite profiling of Arabidopsis leaves reveals fundamental effects of the thiol-disulfide status on plant metabolism

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MIDAW: a web tool for statistical analysis of microarray data

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

TM4: a free, open-source system for microarray data management and analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The long-term response to fluctuating light quality is an important and distinct light acclimation mechanism that supports survival of Arabidopsis thaliana under low light conditions

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plastoquinone redox control of chloroplast thylakoid protein phosphorylation and distribution of excitation energy between photosystems: discovery, background, implications.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Redox regulation: a broadening horizon

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Photosynthetic acclimation: state transitions and adjustment of photosystem stoichiometry--functional relationships between short-term and long-term light quality acclimation in plants.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

State transitions revisited—a buffering system for dynamic low light acclimation of Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The water-water cycle is essential for chloroplast protection in the absence of stress

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A novel mechanism of nuclear photosynthesis gene regulation by redox signals from the chloroplast during photosystem stoichiometry adjustment

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional flexibility and acclimation of the thylakoid membrane

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Improper excess light energy dissipation in Arabidopsis results in a metabolic reprogramming

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromatic regulation inChlamydomonas reinhardtii alters photosystem stoichiometry and improves the quantum efficiency of photosynthesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Retrograde plastid redox signals in the expression of nuclear genes for chloroplast proteins of Arabidopsis thaliana.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cyclic, pseudocyclic and noncyclic photophosphorylation: new links in the chain

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reactive oxygen gene network of plants.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The stoichiometry of the two photosystems in higher plants revisited

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Post-Transcriptional Control of Plastid mRNA Accumulation during Adaptation of Chloroplasts to Different Light Quality Environments

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Light-regulated changes in abundance and polyribosome association of ferredoxin mRNA are dependent on photosynthesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Photosynthetic electron flow regulates transcription of the psaB gene in pea (Pisum sativum L.) chloroplasts through the redox state of the plastoquinone pool

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Covariations in the nuclear chloroplast transcriptome reveal a regulatory master-switch.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Redox regulation of carbon storage and partitioning in response to light and sugars.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Photosynthetic redox regulation of the plastocyanin promoter in tobacco

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Redox state of plastoquinone pool regulates expression of Arabidopsis thaliana genes in response to elevated irradiance

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional specialization amongst the Arabidopsis Toc159 family of chloroplast protein import receptors

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Redox regulation and modification of proteins controlling chloroplast gene expression.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plastid-to-nucleus retrograde signaling

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of mutants of Arabidopsis defective in acclimation of photosynthesis to the light environment.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Adjustments of photosystem stoichiometry in chloroplasts improve the quantum efficiency of photosynthesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Photosynthetic antenna size in higher plants is controlled by the plastoquinone redox state at the post-transcriptional rather than transcriptional level

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interorganellar communication

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NTRC links built-in thioredoxin to light and sucrose in regulating starch synthesis in chloroplasts and amyloplasts.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of the Arabidopsis transcriptome by oxidative stress

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide analysis of hydrogen peroxide-regulated gene expression in Arabidopsis reveals a high light-induced transcriptional cluster involved in anthocyanin biosynthesis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

State transitions reveal the dynamics and flexibility of the photosynthetic apparatus

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Redox signaling in the chloroplast: the ferredoxin/thioredoxin system

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plastid redox state and sugars: interactive regulators of nuclear-encoded photosynthetic gene expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification by large-scale screening of phytochrome-regulated genes in etiolated seedlings of Arabidopsis using a fluorescent differential display technique

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rapid induction of distinct stress responses after the release of singlet oxygen in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A mutant of Arabidopsis lacking the triose-phosphate/phosphate translocator reveals metabolic regulation of starch breakdown in the light

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cooperative regulation of light-harvesting complex II phosphorylation via the plastoquinol and ferredoxin-thioredoxin system in chloroplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/19737978

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1105/TPC.108.062018

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19737978%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

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1 reference

Europe PubMed Central

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7 February 2020

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