(Q64121161)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30789893%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

title

Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30789893%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

1 reference

Patrick R van den Berg

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30789893%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

Noémie Bérenger-Currias

4

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24 April 2020

Esmée Adegeest

5

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24 April 2020

Maarten Menschaart

8

1 reference

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Susana Chuva de Sousa Lopes

24 April 2020

9

1 reference

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24 April 2020

Stefan Semrau

10

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24 April 2020

author name string

Mazène Hochane

1

1 reference

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24 April 2020

Xueying Fan

3

1 reference

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24 April 2020

Monika Bialecka

6

1 reference

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24 April 2020

Maaike Nieveen

7

1 reference

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24 April 2020

language of work or name

English

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publication date

21 February 2019

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24 April 2020

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24 April 2020

volume

17

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24 April 2020

issue

2

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24 April 2020

page(s)

e3000152

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Creative Commons Attribution 4.0 International

24 April 2020

copyright license

start time

21 February 2019

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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describes a project that uses

ImageJ

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC6400406/fullTextXML

inferred from PubMed Central ID database lookup

edgeR

object named as

EdgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

edgeR

0 references

cites work

A Retinoic Acid-Responsive Element in Human Midkine Gene1

1 reference

12 December 2020

Evidence that embryonic kidney cells expressing flk-1 are intrinsic, vasculogenic angioblasts

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Small proteoglycans of normal adult human kidney: distinct expression patterns of decorin, biglycan, fibromodulin, and lumican

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The secreted glycoprotein Noelin-1 promotes neurogenesis in Xenopus

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12 December 2020

Midkine is involved in kidney development and in its regulation by retinoids

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12 December 2020

The mouse Kreisler (Krml1/MafB) segmentation gene is required for differentiation of glomerular visceral epithelial cells

1 reference

12 December 2020

Midkine expression in the course of nephrogenesis and its role in ischaemic reperfusion injury

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Identification of kidney mesenchymal genes by a combination of microarray analysis and Sall1-GFP knockin mice.

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12 December 2020

Common markers of proliferation.

1 reference

12 December 2020

The ECM protein nephronectin promotes kidney development via integrin alpha8beta1-mediated stimulation of Gdnf expression

1 reference

12 December 2020

Cited1 and Cited2 are differentially expressed in the developing kidney but are not required for nephrogenesis

1 reference

12 December 2020

R-Spondin family members regulate the Wnt pathway by a common mechanism

1 reference

12 December 2020

Osr1 expression demarcates a multi-potent population of intermediate mesoderm that undergoes progressive restriction to an Osr1-dependent nephron progenitor compartment within the mammalian kidney

1 reference

12 December 2020

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

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12 December 2020

Regulation of the hyaluronan synthase 2 gene by convergence in cyclic AMP response element-binding protein and retinoid acid receptor signaling.

1 reference

12 December 2020

High-resolution gene expression analysis of the developing mouse kidney defines novel cellular compartments within the nephron progenitor population

1 reference

12 December 2020

Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt

1 reference

12 December 2020

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

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12 December 2020

Non-cell-autonomous retinoid signaling is crucial for renal development

1 reference

12 December 2020

Patterning a complex organ: branching morphogenesis and nephron segmentation in kidney development

1 reference

12 December 2020

Uncx regulates proliferation of neural progenitor cells and neuronal survival in the olfactory epithelium

1 reference

12 December 2020

Defining the molecular character of the developing and adult kidney podocyte

1 reference

12 December 2020

Mammalian kidney development: principles, progress, and projections

1 reference

12 December 2020

Meta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations

1 reference

12 December 2020

NIH Image to ImageJ: 25 years of image analysis

1 reference

12 December 2020

Genetic controls and cellular behaviors in branching morphogenesis of the renal collecting system

1 reference

12 December 2020

Mesenchymal stem cells protect podocytes from apoptosis induced by high glucose via secretion of epithelial growth factor

1 reference

12 December 2020

Why and how we determine nephron number.

1 reference

12 December 2020

An integrative study of the genetic, social and environmental determinants of chronic kidney disease characterized by tubulointerstitial damages in the North Central Region of Sri Lanka

1 reference

12 December 2020

FuseFISH: robust detection of transcribed gene fusions in single cells

1 reference

12 December 2020

Single cell dissection of early kidney development: multilineage priming

1 reference

12 December 2020

Spatially restricted hyaluronan production by Has2 drives epithelial tubulogenesis in vitro.

1 reference

12 December 2020

The RNA-binding protein DDX1 promotes primary microRNA maturation and inhibits ovarian tumor progression.

1 reference

12 December 2020

Identification of a multipotent self-renewing stromal progenitor population during mammalian kidney organogenesis

1 reference

12 December 2020

The earliest metanephric arteriolar progenitors and their role in kidney vascular development

1 reference

12 December 2020

Development of the follicular basement membrane during human gametogenesis and early folliculogenesis

1 reference

12 December 2020

The Notch pathway mediates the angiotensin II-induced synthesis of extracellular matrix components in podocytes

1 reference

12 December 2020

KeyGenes, a Tool to Probe Tissue Differentiation Using a Human Fetal Transcriptional Atlas

1 reference

12 December 2020

Computational assignment of cell-cycle stage from single-cell transcriptome data

1 reference

12 December 2020

Sall1 in renal stromal progenitors non-cell autonomously restricts the excessive expansion of nephron progenitors

1 reference

12 December 2020

SOX9 modulates the expression of key transcription factors required for heart valve development.

1 reference

12 December 2020

Genetic associations at 53 loci highlight cell types and biological pathways relevant for kidney function

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12 December 2020

Vascular Growth Factors and Glomerular Disease.

1 reference

12 December 2020

Development of the Mammalian Kidney

1 reference

12 December 2020

Pooling across cells to normalize single-cell RNA sequencing data with many zero counts.

1 reference

12 December 2020

Cap mesenchyme cell swarming during kidney development is influenced by attraction, repulsion, and adhesion to the ureteric tip.

1 reference

12 December 2020

Trans-ethnic Fine Mapping Highlights Kidney-Function Genes Linked to Salt Sensitivity

1 reference

12 December 2020

c-jun is differentially expressed in embryonic and adult neural precursor cells.

1 reference

12 December 2020

Cellular retinoid binding-proteins, CRBP, CRABP, FABP5: Effects on retinoid metabolism, function and related diseases

1 reference

12 December 2020

Foxc1 and Foxc2 are necessary to maintain glomerular podocytes

1 reference

12 December 2020

1000 Genomes-based meta-analysis identifies 10 novel loci for kidney function

1 reference

12 December 2020

Podocytes regulate the glomerular basement membrane protein nephronectin by means of miR-378a-3p in glomerular diseases

1 reference

12 December 2020

Podocytes from the diagnostic and therapeutic point of view

1 reference

12 December 2020

Embryonic AP1 Transcription Factor Deficiency Causes a Collodion Baby-Like Phenotype

1 reference

12 December 2020

Mechanical challenges to the glomerulus and podocyte loss: evolution of a paradigm

1 reference

12 December 2020

Fibroblast growth factor 1 ameliorates diabetic nephropathy by an anti-inflammatory mechanism.

1 reference

12 December 2020

HMGB2 expression is associated with transition from a quiescent to an activated state of adult neural stem cells.

1 reference

12 December 2020

Reversed graph embedding resolves complex single-cell trajectories.

1 reference

12 December 2020

Psychrophilic proteases dramatically reduce single-cell RNA-seq artifacts: a molecular atlas of kidney development

1 reference

12 December 2020

Single-cell sequencing reveals dissociation-induced gene expression in tissue subpopulations.

1 reference

12 December 2020

Haploinsufficiency for the Six2 gene increases nephron progenitor proliferation promoting branching and nephron number

1 reference

12 December 2020

Conserved and Divergent Features of Mesenchymal Progenitor Cell Types within the Cortical Nephrogenic Niche of the Human and Mouse Kidney.

1 reference

12 December 2020

Conserved and Divergent Molecular and Anatomic Features of Human and Mouse Nephron Patterning.

1 reference

12 December 2020

Conserved and Divergent Features of Human and Mouse Kidney Organogenesis.

1 reference

12 December 2020

Sox11 gene disruption causes congenital anomalies of the kidney and urinary tract (CAKUT).

1 reference

12 December 2020

Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors

1 reference

12 December 2020

Parental haplotype-specific single-cell transcriptomics reveal incomplete epigenetic reprogramming in human female germ cells.

1 reference

12 December 2020

Progressive Recruitment of Mesenchymal Progenitors Reveals a Time-Dependent Process of Cell Fate Acquisition in Mouse and Human Nephrogenesis

1 reference

12 December 2020

Single-cell analysis of progenitor cell dynamics and lineage specification in the human fetal kidney

1 reference

12 December 2020

Dissecting the Global Dynamic Molecular Profiles of Human Fetal Kidney Development by Single-Cell RNA Sequencing

1 reference

12 December 2020

10.1371/JOURNAL.PBIO.3000152

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30789893%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30789893%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

PubMed publication ID

30789893

1 reference