Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q73594418)
Watch
English
Computer simulations of protein folding by targeted molecular dynamics
scientific article published on 01 May 2000
In more languages
default values for all languages
No label defined
No description defined
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10737947
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10737947%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 November 2019
title
Computer simulations of protein folding by targeted molecular dynamics
(English)
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10737947
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10737947%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 November 2019
main subject
computer simulation
1 reference
based on heuristic
inferred from title
author name string
P Ferrara
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10737947
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10737947%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 November 2019
J Apostolakis
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10737947
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10737947%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 November 2019
A Caflisch
series ordinal
3
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10737947
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10737947%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 November 2019
publication date
1 May 2000
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10737947
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10737947%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 November 2019
published in
Proteins
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10737947
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10737947%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 November 2019
volume
39
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10737947
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10737947%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 November 2019
issue
3
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10737947
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10737947%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 November 2019
page(s)
252-260
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10737947
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10737947%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 November 2019
cites work
Theory of protein folding: the energy landscape perspective
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
From Levinthal to pathways to funnels
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Protein Folding: A Perspective from Theory and Experiment.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
The fundamentals of protein folding: bringing together theory and experiment
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Matching theory and experiment in protein folding
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
How does a protein fold?
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Principles of protein folding--a perspective from simple exact models.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Simulations of the folding of a globular protein
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Can protein unfolding simulate protein folding?
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
First-principles calculation of the folding free energy of a three-helix bundle protein
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Calculations on folding of segment B1 of streptococcal protein G
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Pathways to a protein folding intermediate observed in a 1-microsecond simulation in aqueous solution
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Molecular switch in signal transduction: reaction paths of the conformational changes in ras p21.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
The Structure of the Transition State for Folding of Chymotrypsin Inhibitor 2 Analysed by Protein Engineering Methods: Evidence for a Nucleation-condensation Mechanism for Protein Folding
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Identification and characterization of the unfolding transition state of chymotrypsin inhibitor 2 by molecular dynamics simulations
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
"New view" of protein folding reconciled with the old through multiple unfolding simulations.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
CHARMM: A program for macromolecular energy, minimization, and dynamics calculations
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Simulation of activation free energies in molecular systems
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Effective energy function for proteins in solution
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Solvation energy in protein folding and binding
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
An Efficient Mean Solvation Force Model for Use in Molecular Dynamics Simulations of Proteins in Aqueous Solution
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Some Studies Concerning Rotating Axes and Polyatomic Molecules
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Forced unfolding of fibronectin type 3 modules: an analysis by biased molecular dynamics simulations
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Some factors in the interpretation of protein denaturation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
The early stage of folding of villin headpiece subdomain observed in a 200-nanosecond fully solvated molecular dynamics simulation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
The Levinthal paradox: yesterday and today
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Theory for the folding and stability of globular proteins
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Important role of hydrogen bonds in the structurally polarized transition state for folding of the src SH3 domain
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Obligatory steps in protein folding and the conformational diversity of the transition state
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Hierarchy of structure loss in MD simulations of src SH3 domain unfolding.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F%28SICI%291097-0134%2820000515%2939%3A3%3C252%3A%3AAID-PROT80%3E3.0.CO%3B2-3
retrieved
21 January 2018
Identifiers
DOI
10.1002/(SICI)1097-0134(20000515)39:3<252::AID-PROT80>3.0.CO;2-3
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10737947
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10737947%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 November 2019
PubMed publication ID
10737947
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10737947
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10737947%20AND%20SRC:MED&resulttype=core&format=json
retrieved
5 November 2019
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit