(Q74553587)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11571305%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

title

Interaction of the alpha-subunit of Escherichia coli RNA polymerase with DNA: rigid body nature of the protein-DNA contact (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11571305%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

1 reference

Heyduk E

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11571305%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

Baichoo N

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11571305%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

Heyduk T

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11571305%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

language of work or name

English

0 references

publication date

24 September 2001

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11571305%20AND%20SRC:MED&resulttype=core&format=json

Journal of Biological Chemistry

11 November 2019

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11571305%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

volume

276

1 reference

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11 November 2019

issue

48

1 reference

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11 November 2019

page(s)

44598-44603

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11571305%20AND%20SRC:MED&resulttype=core&format=json

UPs and downs in bacterial transcription initiation: the role of the alpha subunit of RNA polymerase in promoter recognition

11 November 2019

cites work

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Factor-independent activation of Escherichia coli rRNA transcription. I. Kinetic analysis of the roles of the upstream activator region and supercoiling on transcription of the rrnB P1 promoter in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

DNA-binding determinants of the alpha subunit of RNA polymerase: novel DNA-binding domain architecture

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Domain organization of RNA polymerase alpha subunit: C-terminal 85 amino acids constitute a domain capable of dimerization and DNA binding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Flexible linker in the RNA polymerase alpha subunit facilitates the independent motion of the C-terminal activator contact domain.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Identification of an UP element consensus sequence for bacterial promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Bacterial promoter architecture: subsite structure of UP elements and interactions with the carboxy-terminal domain of the RNA polymerase alpha subunit

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Fine structure of E. coli RNA polymerase-promoter interactions: alpha subunit binding to the UP element minor groove

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Factor independent activation of rrnB P1. An "extended" promoter with an upstream element that dramatically increases promoter strength

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Promoter recognition by Escherichia coli RNA polymerase: effects of the UP element on open complex formation and promoter clearance

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Context-dependent effects of upstream A-tracts. Stimulation or inhibition of Escherichia coli promoter function

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

An inactive open complex mediated by an UP element at Escherichia coli promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Visualization and quantitative analysis of complex formation between E. coli RNA polymerase and an rRNA promoter in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Factor-independent activation of Escherichia coli rRNA transcription. II. characterization of complexes of rrnB P1 promoters containing or lacking the upstream activator region with Escherichia coli RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Recombinant Escherichia coli RNA polymerase: purification of individually overexpressed subunits and in vitro assembly.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Rapid RNA polymerase genetics: one-day, no-column preparation of reconstituted recombinant Escherichia coli RNA polymerase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Mapping conformational changes in a protein: application of a protein footprinting technique to cAMP-induced conformational changes in cAMP receptor protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Application of fluorescence energy transfer and polarization to monitor Escherichia coli cAMP receptor protein and lac promoter interaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Fluorescence anisotropy: rapid, quantitative assay for protein-DNA and protein-protein interaction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Measuring the binding of small molecules to protein from binding-induced alterations of physical-chemical properties

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Determinants of RNA polymerase alpha subunit for interaction with beta, beta', and sigma subunits: hydroxyl-radical protein footprinting

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: the roles of ion association or release, screening, and ion effects on water activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Mapping cyclic nucleotide-induced conformational changes in cyclicAMP receptor protein by a protein footprinting technique using different chemical proteases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

DNA-induced conformational changes in cyclic AMP receptor protein: detection and mapping by a protein footprinting technique using multiple chemical proteases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Quantitative DNase footprint titration: a method for studying protein-DNA interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Different conformations of double-stranded nucleic acid in solution as revealed by circular dichroism

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

CRP-DNA complexes: inducing the A-like form in the binding sites with an extended central spacer

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Thermodynamic, spectroscopic, and equilibrium binding studies of DNA sequence context effects in six 22-base pair deoxyoligonucleotides

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Thermodynamics of sequence-specific protein-DNA interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Protein-DNA recognition complexes: conservation of structure and binding energy in the transition state

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Structural and thermodynamic strategies for site-specific DNA binding proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Coupling of local folding to site-specific binding of proteins to DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Positioning of two alpha subunit carboxy-terminal domains of RNA polymerase at promoters by two transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M107760200

21 January 2018

Identifiers

DOI

10.1074/JBC.M107760200

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11571305%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

1 reference