(Q77538024)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11807948%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

title

Alignments grow, secondary structure prediction improves (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11807948%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

author name string

Dariusz Przybylski

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11807948%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

Burkhard Rost

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11807948%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

publication date

1 February 2002

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6 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11807948%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

volume

46

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11807948%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

page(s)

197-205

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11807948%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11807948%20AND%20SRC:MED&resulttype=core&format=json

Local alignment statistics

6 December 2019

cites work

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Using CLUSTAL for multiple sequence alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Database of homology-derived protein structures and the structural meaning of sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

21 January 2018

The Protein Data Bank

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

PHD: predicting one-dimensional protein structure by profile-based neural networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Patterns of divergence in homologous proteins as indicators of secondary and tertiary structure: a prediction of the structure of the catalytic domain of protein kinases

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Do aligned sequences share the same fold?

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Twilight zone of protein sequence alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

The cytochrome fold and the evolution of bacterial energy metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Improvements in the prediction of protein backbone topography by reduction of statistical errors

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Prediction of secondary structure by evolutionary comparison: application to the alpha subunit of tryptophan synthase

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Prediction of protein secondary structure and active sites using the alignment of homologous sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Jury returns on structure prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Prediction of protein secondary structure at better than 70% accuracy

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Combining evolutionary information and neural networks to predict protein secondary structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Evaluation of current techniques for ab initio protein structure prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Knowledge-based protein secondary structure assignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

A simple and fast approach to prediction of protein secondary structure from multiply aligned sequences with accuracy above 70%.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Prediction of protein secondary structure by combining nearest-neighbor algorithms and multiple sequence alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Improving protein secondary structure prediction with aligned homologous sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Improving prediction of protein secondary structure using structured neural networks and multiple sequence alignments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Exploring the limits of nearest neighbour secondary structure prediction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Bona fide prediction of aspects of protein conformation. Assigning interior and surface residues from patterns of variation and conservation in homologous protein sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

A model recognition approach to the prediction of all-helical membrane protein structure and topology

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Prediction of transmembrane segments in proteins utilising multiple sequence alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Conservation and prediction of solvent accessibility in protein families

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Use of amino acid environment-dependent substitution tables and conformational propensities in structure prediction from aligned sequences of homologous proteins. I. Solvent accessibility classes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

A predicted consensus structure for the protein kinase C2 homology (C2H) domain, the repeating unit of synaptotagmin

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Gibbs motif sampling: detection of bacterial outer membrane protein repeats

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Transmembrane helices predicted at 95% accuracy

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Topology prediction for helical transmembrane proteins at 86% accuracy

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Predicting solvent accessibility: higher accuracy using Bayesian statistics and optimized residue substitution classes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Prediction of transmembrane alpha-helices in prokaryotic membrane proteins: the dense alignment surface method

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Application of multiple sequence alignment profiles to improve protein secondary structure prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Quantification of secondary structure prediction improvement using multiple alignments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Protein secondary structure prediction based on position-specific scoring matrices

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Evaluation and improvement of multiple sequence methods for protein secondary structure prediction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Analysis of compositionally biased regions in sequence databases

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Predicting coiled coils from protein sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Redefining the goals of protein secondary structure prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

A modified definition of Sov, a segment-based measure for protein secondary structure prediction assessment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Exploiting the past and the future in protein secondary structure prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Identification of common molecular subsequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

Performance evaluation of amino acid substitution matrices

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

The PSIPRED protein structure prediction server

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

A method for measuring the non-random bias of a codon usage table

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10029

21 January 2018

Identifiers

DOI

10.1002/PROT.10029

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11807948%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

1 reference