(Q79327211)

English

Characterization of a cyanobacterial-like uptake [NiFe] hydrogenase: EPR and FTIR spectroscopic studies of the enzyme from Acidithiobacillus ferrooxidans

scientific article published on 03 November 2006

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17082918%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

Characterization of a cyanobacterial-like uptake [NiFe] hydrogenase: EPR and FTIR spectroscopic studies of the enzyme from Acidithiobacillus ferrooxidans (English)

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21 December 2019

1 reference

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Acidithiobacillus ferrooxidans

1 reference

based on heuristic

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author name string

Olga Schröder

1

1 reference

Europe PubMed Central

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21 December 2019

Boris Bleijlevens

2

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21 December 2019

Thyra E de Jongh

3

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21 December 2019

Zhujun Chen

4

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21 December 2019

Tianshu Li

5

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21 December 2019

Jörg Fischer

6

1 reference

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21 December 2019

Jochen Förster

7

1 reference

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21 December 2019

Cornelius G Friedrich

8

1 reference

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21 December 2019

Kimberly A Bagley

9

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21 December 2019

Simon P J Albracht

10

1 reference

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21 December 2019

Wolfgang Lubitz

11

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21 December 2019

publication date

3 November 2006

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21 December 2019

Journal of Biological Inorganic Chemistry

1 reference

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21 December 2019

12

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21 December 2019

2

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21 December 2019

212-233

1 reference

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21 December 2019

https://scigraph.springernature.com/pub.10.1007/s00775-006-0185-7

0 references

The H2 sensor of Ralstonia eutropha. Biochemical characteristics, spectroscopic properties, and its interaction with a histidine protein kinase

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural and oxidation-state changes at its nonstandard Ni-Fe site during activation of the NAD-reducing hydrogenase from Ralstonia eutropha detected by X-ray absorption, EPR, and FTIR spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Activation and deactivation of the membrane-bound hydrogenase from Desulfovibrio desulfuricans, Norway strain.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Further characterization of the spin coupling observed in oxidized hydrogenase from Chromatium vinosum. A Mössbauer and multifrequency EPR study

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural organization of the Ni and (4Fe-4S) centers in the active form of Desulfovibrio gigas hydrogenase. Analysis of the magnetic interactions by electron paramagnetic resonance spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An improved purification procedure for the soluble [NiFe]-hydrogenase of Ralstonia eutropha: new insights into its (in)stability and spectroscopic properties

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The active site of the [FeFe]-hydrogenase from Desulfovibrio desulfuricans. I. Light sensitivity and magnetic hyperfine interactions as observed by electron paramagnetic resonance.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Single crystal EPR studies of the oxidized active site of [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The [NiFe] hydrogenase from Allochromatium vinosum studied in EPR-detectable states: H/D exchange experiments that yield new information about the structure of the active site

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cyanobacterial H2 production ? a comparative analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The activation of the [NiFe]-hydrogenase from Allochromatium vinosum. An infrared spectro-electrochemical study

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative amino acid analysis of bovine NADH:ubiquinone oxidoreductase (Complex I) and related enzymes. Consequences for the number of prosthetic groups.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Electrocatalytic hydrogen oxidation by an enzyme at high carbon monoxide or oxygen levels

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Distribution of thiobacillus ferrooxidans and leptospirillum ferrooxidans: implications for generation of acid mine drainage

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gas access to the active site of Ni-Fe hydrogenases probed by X-ray crystallography and molecular dynamics.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Measurement of protein using bicinchoninic acid

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The soluble [NiFe]-hydrogenase from Ralstonia eutropha contains four cyanides in its active site, one of which is responsible for the insensitivity towards oxygen

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Electrochemical potential-step investigations of the aerobic interconversions of [NiFe]-hydrogenase from Allochromatium vinosum: insights into the puzzling difference between unready and ready oxidized inactive states

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Assembly of Tat-dependent [NiFe] hydrogenases: identification of precursor-binding accessory proteins.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coordinating assembly and export of complex bacterial proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Iron-sulfur clusters: nature's modular, multipurpose structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Light-driven hydrogen production by a hybrid complex of a [NiFe]-hydrogenase and the cyanobacterial photosystem I

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reactions of H2, CO, and O2 with active [NiFe]-hydrogenase from Allochromatium vinosum. A stopped-flow infrared study

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

[3Fe-4S] to [4Fe-4S] cluster conversion in Desulfovibrio fructosovorans [NiFe] hydrogenase by site-directed mutagenesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nickel hydrogenases: in search of the active site

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

UV-A/blue-light inactivation of the 'metal-free' hydrogenase (Hmd) from methanogenic archaea

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural differences between the ready and unready oxidized states of [NiFe] hydrogenases

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

On the anomalous temperature behaviour of the EPR signal of monovalent nickel in hydrogenase

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The cofactor of the iron-sulfur cluster free hydrogenase hmd: structure of the light-inactivation product

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Pre-steady-state kinetics of the reactions of [NiFe]-hydrogenase from Chromatium vinosum with H2 and CO

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Carbon monoxide as an intrinsic ligand to iron in the active site of the iron-sulfur-cluster-free hydrogenase H2-forming methylenetetrahydromethanopterin dehydrogenase as revealed by infrared spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Relativistic DFT calculations of the paramagnetic intermediates of [NiFe] hydrogenase. Implications for the enzymatic mechanism

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hydrogen-induced activation of the [NiFe]-hydrogenase from Allochromatium vinosum as studied by stopped-flow infrared spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Infrared studies on the interaction of carbon monoxide with divalent nickel in hydrogenase from Chromatium vinosum

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Activation process of [NiFe] hydrogenase elucidated by high-resolution X-ray analyses: conversion of the ready to the unready state

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The crystal structure of a reduced [NiFeSe] hydrogenase provides an image of the activated catalytic center

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

17O ENDOR Detection of a Solvent-Derived Ni−(OHx)−Fe Bridge That Is Lost upon Activation of the Hydrogenase fromDesulfovibrio gigas

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The mechanism of activation of a [NiFe]-hydrogenase by electrons, hydrogen, and carbon monoxide.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Oxygen tolerance of the H2-sensing [NiFe] hydrogenase from Ralstonia eutropha H16 is based on limited access of oxygen to the active site.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nature and electronic structure of the Ni-X dinuclear center of Desulfovibrio gigas hydrogenase. Implications for the enzymatic mechanism

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Unusual ligand structure in Ni-Fe active center and an additional Mg site in hydrogenase revealed by high resolution X-ray structure analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Distinct redox behaviour of prosthetic groups in ready and unready hydrogenase from Chromatium vinosum

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mössbauer studies of the iron-sulfur cluster-free hydrogenase: the electronic state of the mononuclear Fe active site

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Infrared-detectable groups sense changes in charge density on the nickel center in hydrogenase from Chromatium vinosum

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Monovalent nickel in hydrogenase from Chromatium vinosum. Light sensitivity and evidence for direct interaction with hydrogen

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Purification and characterization of the hydrogenase from Thiobacillus ferrooxidans.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Carbon Monoxide and Cyanide as Intrinsic Ligands to Iron in the Active Site of [NiFe]-Hydrogenases

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystal structure of the nickel-iron hydrogenase from Desulfovibrio gigas

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An orientation-selected ENDOR and HYSCORE study of the Ni-C active state of Desulfovibrio vulgaris Miyazaki F hydrogenase

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Putative signal peptide on the small subunit of the periplasmic hydrogenase from Desulfovibrio vulgaris

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A single-crystal ENDOR and density functional theory study of the oxidized states of the [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

EPR and redox properties of Desulfovibrio vulgaris Miyazaki hydrogenase: comparison with the Ni-Fe enzyme from Desulfovibrio gigas

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Catalytic electron transport in Chromatium vinosum [NiFe]-hydrogenase: application of voltammetry in detecting redox-active centers and establishing that hydrogen oxidation is very fast even at potentials close to the reversible H+/H2 value.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The auxiliary protein HypX provides oxygen tolerance to the soluble [NiFe]-hydrogenase of ralstonia eutropha H16 by way of a cyanide ligand to nickel

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The active site of the [FeFe]-hydrogenase from Desulfovibrio desulfuricans. II. Redox properties, light sensitivity and CO-ligand exchange as observed by infrared spectroscopy.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Relativistic DFT calculation of the reaction cycle intermediates of [NiFe] hydrogenase: a contribution to understanding the enzymatic mechanism

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two EPR-detectable [4Fe-4S] clusters, N2a and N2b, are bound to the NuoI (TYKY) subunit of NADH:ubiquinone oxidoreductase (Complex I) from Rhodobacter capsulatus.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Direct Detection of a Hydrogen Ligand in the [NiFe] Center of the Regulatory H2-Sensing Hydrogenase fromRalstoniaeutrophain Its Reduced State by HYSCORE and ENDOR Spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biological activition of hydrogen

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Spectroelectrochemical characterization of the [NiFe] hydrogenase of Desulfovibrio vulgaris Miyazaki F

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Single crystal EPR studies of the reduced active site of [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The autotrophic oxidation of iron by a new bacterium, thiobacillus ferrooxidans

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

EPR experiments to elucidate the structure of the ready and unready states of the [NiFe] hydrogenase of Desulfovibrio vulgaris Miyazaki F

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Orientation-selected ENDOR of the active center in Chromatium vinosum [NiFe] hydrogenase in the oxidized "ready" state

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Direct comparison of the electrocatalytic oxidation of hydrogen by an enzyme and a platinum catalyst

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Removal of the bridging ligand atom at the Ni-Fe active site of [NiFe] hydrogenase upon reduction with H2, as revealed by X-ray structure analysis at 1.4 A resolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

On the redox equilibrium between H2 and hydrogenase

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of the active site of a hydrogen sensor from Alcaligenes eutrophus

1 reference

https://pubmed.ncbi.nlm.nih.gov/17082918

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00775-006-0185-7

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17082918%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17082918%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

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