(Q80434903)

English

Comparison between a coffee single copy chromosomal region and Arabidopsis duplicated counterparts evidenced high level synteny between the coffee genome and the ancestral Arabidopsis genome

scientific article published on 06 June 2007

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17551672%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

Comparison between a coffee single copy chromosomal region and Arabidopsis duplicated counterparts evidenced high level synteny between the coffee genome and the ancestral Arabidopsis genome (English)

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17551672%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

0 references

1

object named as

Laetitia Mahé

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17551672%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

Marie-Christine Combes

2

object named as

Marie-Christine Combes

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17551672%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

author name string

Philippe Lashermes

3

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17551672%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

publication date

6 June 2007

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17551672%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

number of pages

13

1 reference

based on heuristic

inferred from page(s)

Plant Molecular Biology

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17551672%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

64

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17551672%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

6

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17551672%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

699-711

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17551672%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

https://scigraph.springernature.com/pub.10.1007/s11103-007-9191-6

0 references

Genome relationships: the grass model in current research

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Modeling gene and genome duplications in eukaryotes

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A bacterial artificial chromosome library for sugarcane

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Utilization of tomato microarrays for comparative gene expression analysis in the Solanaceae

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular characterisation and origin of the Coffea arabica L. genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fossil evidence and phylogeny: the age of major angiosperm clades based on mesofossil and macrofossil evidence from Cretaceous deposits

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Estimates of conserved microsynteny among the genomes of Glycine max, Medicago truncatula and Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic linkage map of Coffea canephora: effect of segregation distortion and analysis of recombination rate in male and female meioses

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative genomic analysis of sequences sampled from a small region on soybean (Glycine max) molecular linkage group G.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Exploitation of colinear relationships between the genomes of Lotus japonicus, Pisum sativum and Arabidopsis thaliana, for positional cloning of a legume symbiosis gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The hidden duplication past of Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Synteny conservation between the Prunus genome and both the present and ancestral Arabidopsis genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coffee and tomato share common gene repertoires as revealed by deep sequencing of seed and cherry transcripts

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome organization in dicots: genome duplication in Arabidopsis and synteny between soybean and Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification, analysis, and utilization of conserved ortholog set markers for comparative genomics in higher plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conservation of microstructure between a sequenced region of the genome of rice and multiple segments of the genome of Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chloroplast and nuclear gene sequences indicate late Pennsylvanian time for the last common ancestor of extant seed plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High throughput fingerprint analysis of large-insert clones

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phylogenetic analysis of chloroplast DNA variation in Coffea L.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A comparative phylogenetic approach for dating whole genome duplication events

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Combining bioinformatics and phylogenetics to identify large sets of single-copy orthologous genes (COSII) for comparative, evolutionary and systematic studies: a test case in the euasterid plant clade

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative physical mapping reveals features of microsynteny between Glycine max, Medicago truncatula, and Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The origins of genomic duplications in Arabidopsis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Significant microsynteny with new evolutionary highlights is detected between Arabidopsis and legume model plants despite the lack of macrosynteny

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The evolutionary fate and consequences of duplicate genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative genomics of plant chromosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A new fossil flower from the Turonian of New Jersey: Dressiantha bicarpellata gen. et sp. nov. (Capparales).

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Introgression molecular analysis of a leaf rust resistance gene from Coffea liberica into C. arabica L.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Extensive duplication and reshuffling in the Arabidopsis genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative genome mapping in Brassica

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Introgression into the allotetraploid coffee ( Coffea arabica L.): segregation and recombination of the C. canephora genome in the tetraploid interspecific hybrid ( C. arabicax C. canephora)

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Construction and characterisation of a BAC library for genome analysis of the allotetraploid coffee species (Coffea arabica L.).

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparing sequenced segments of the tomato and Arabidopsis genomes: large-scale duplication followed by selective gene loss creates a network of synteny

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Synteny between Arabidopsis thaliana and rice at the genome level: a tool to identify conservation in the ongoing rice genome sequencing project

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification and analysis of homoeologous segments of the genomes of rice and Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The age of the Arabidopsis thaliana genome duplication

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of microsatellite loci in Coffea arabica and related coffee species

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Toward a unified genetic map of higher plants, transcending the monocot-dicot divergence

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative Sequence Analysis Reveals Extensive Microcolinearity in the Lateral Suppressor Regions of the Tomato, Arabidopsis, and Capsella Genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

1 reference

https://pubmed.ncbi.nlm.nih.gov/17551672

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S11103-007-9191-6

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17551672%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17551672%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q80434903&oldid=2124972712"