(Q81538433)

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Translation mechanisms involving long-distance base pairing interactions between the 5' and 3' non-translated regions and internal ribosomal entry are conserved for both genomic RNAs of Blackcurrant reversion nepovirus

scientific article published on 31 October 2007

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9 January 2020

Translation mechanisms involving long-distance base pairing interactions between the 5' and 3' non-translated regions and internal ribosomal entry are conserved for both genomic RNAs of Blackcurrant reversion nepovirus (English)

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9 January 2020

author name string

Alexey Karetnikov

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Kirsi Lehto

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31 October 2007

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2

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9 January 2020

ARC-1, a sequence element complementary to an internal 18S rRNA segment, enhances translation efficiency in plants when present in the leader or intercistronic region of mRNAs

1 reference

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Where to begin? The mechanism of translation initiation codon selection in eukaryotes

1 reference

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Searching for IRES

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A translational enhancer element on the 3'-proximal end of the Panicum mosaic virus genome

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Picornavirus IRESes and the poly(A) tail jointly promote cap-independent translation in a mammalian cell-free system

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The hepatitis C virus 3'-untranslated region or a poly(A) tract promote efficient translation subsequent to the initiation phase

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Ribosomal tethering and clustering as mechanisms for translation initiation

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The 3' untranslated region of satellite tobacco necrosis virus RNA stimulates translation in vitro

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Cap-independent translation of maize Hsp101

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Activity of a type 1 picornavirus internal ribosomal entry site is determined by sequences within the 3' nontranslated region

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Competitive translation efficiency at the picornavirus type 1 internal ribosome entry site facilitated by viral cis and trans factors

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Polypurine (A)-rich sequences promote cross-kingdom conservation of internal ribosome entry

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Translational control in positive strand RNA plant viruses

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An mRNA-rRNA base-pairing mechanism for translation initiation in eukaryotes

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End-to-end communication in the modulation of translation by mammalian RNA viruses

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5'-3' RNA-RNA interaction facilitates cap- and poly(A) tail-independent translation of tomato bushy stunt virus mrna: a potential common mechanism for tombusviridae

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Analysis of a 3'-translation enhancer in a tombusvirus: a dynamic model for RNA-RNA interactions of mRNA termini

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The polypyrimidine tract binding protein is required for efficient picornavirus gene expression and propagation

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Structural and mechanistic insights into hepatitis C viral translation initiation

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Cap-independent translation conferred by the 5' leader of tobacco etch virus is eukaryotic initiation factor 4G dependent

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7 January 2021

The tobacco etch viral 5' leader and poly(A) tail are functionally synergistic regulators of translation

1 reference

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7 January 2021

Identification of a Novel Internal Ribosome Entry Site in Giardiavirus That Extends to Both Sides of the Initiation Codon

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7 January 2021

Structural elements in the 5'-untranslated region of giardiavirus transcript essential for internal ribosome entry site-mediated translation initiation

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7 January 2021

A novel interaction of Cap-binding protein complexes eukaryotic initiation factor (eIF) 4F and eIF(iso)4F with a region in the 3'-untranslated region of satellite tobacco necrosis virus

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An unusual internal ribosome entry site in the herpes simplex virus thymidine kinase gene

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Sequence of 1000 nucleotides at the 3′ end of tobacco mosaic virus RNA

1 reference

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The computer simulation of RNA folding pathways using a genetic algorithm.

1 reference

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Base-pairing between untranslated regions facilitates translation of uncapped, nonpolyadenylated viral RNA.

1 reference

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7 January 2021

PSEUDOVIEWER2: Visualization of RNA pseudoknots of any type

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HIV-2 genomic RNA contains a novel type of IRES located downstream of its initiation codon.

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rRNA-complementarity in the 5' untranslated region of mRNA specifying the Gtx homeodomain protein: evidence that base- pairing to 18S rRNA affects translational efficiency

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An unusual internal ribosomal entry site of inverted symmetry directs expression of a potato leafroll polerovirus replication-associated protein

1 reference

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Divergent IRES elements in invertebrates

1 reference

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Internal initiation: IRES elements of picornaviruses and hepatitis c virus

1 reference

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7 January 2021

Picornavirus internal ribosome entry site elements can stimulate translation of upstream genes

1 reference

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7 January 2021

Mammalian poly(A)-binding protein is a eukaryotic translation initiation factor, which acts via multiple mechanisms

1 reference

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7 January 2021

The RNA2 5' leader of Blackcurrant reversion virus mediates efficient in vivo translation through an internal ribosomal entry site mechanism

1 reference

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7 January 2021

Role of the RNA2 3' non-translated region of Blackcurrant reversion nepovirus in translational regulation

1 reference

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7 January 2021

Cap-independent translation of plant viral RNAs

1 reference

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A six-nucleotide segment within the 3' untranslated region of hibiscus chlorotic ringspot virus plays an essential role in translational enhancement

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7 January 2021

Synergism of the 3'-untranslated region and an internal ribosome entry site differentially enhances the translation of a plant virus coat protein

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7 January 2021

The case for mRNA 5' and 3' end cross talk during translation in a eukaryotic cell

1 reference

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7 January 2021

The complete nucleotide sequence of RNA2 of blackcurrant reversion nepovirus

1 reference

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7 January 2021

The long 3' non-translated regions of Blackcurrant reversion virus RNAs are highly conserved between virus isolates representing different phenotypes and geographic origins

1 reference

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7 January 2021

Purification and properties of a new virus from black currant, its affinities with nepoviruses, and its close association with black currant reversion disease

1 reference

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7 January 2021

The 5' untranslated region of PVY RNA, even located in an internal position, enables initiation of translation

1 reference

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7 January 2021

IRES-driven translation is stimulated separately by the FMDV 3'-NCR and poly(A) sequences

1 reference

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7 January 2021

Translation initiation: structures, mechanisms and evolution

1 reference

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7 January 2021

The ribosome filter hypothesis

1 reference

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7 January 2021

5'- and 3'-sequences of satellite tobacco necrosis virus RNA promoting translation in tobacco

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Conservation of RNA structures enables TNV and BYDV 5' and 3' elements to cooperate synergistically in cap-independent translation

1 reference

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7 January 2021

Long-Distance RNA-RNA Interactions in Plant Virus Gene Expression and Replication

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Identification of a motif that mediates polypyrimidine tract-binding protein-dependent internal ribosome entry

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Cap-Independent Translational Enhancement by the 3′ Untranslated Region of Red Clover Necrotic Mosaic Virus RNA1

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1 reference

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IRESite: the database of experimentally verified IRES structures (www.iresite.org).

1 reference

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7 January 2021

Nucleotide sequence of black currant reversion associated nepovirus RNA1.

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Cap-independent translational enhancement of turnip crinkle virus genomic and subgenomic RNAs

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Oscillating kissing stem-loop interactions mediate 5' scanning-dependent translation by a viral 3'-cap-independent translation element

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7 January 2021

Structures required for poly(A) tail-independent translation overlap with, but are distinct from, cap-independent translation and RNA replication signals at the 3' end of Tobacco necrosis virus RNA

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1 reference

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Identification and characterization of the functional elements within the tobacco etch virus 5' leader required for cap-independent translation.

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7 January 2021

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Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17976678%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17976678%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

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