(Q82278353)

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MEF9, an E-subclass pentatricopeptide repeat protein, is required for an RNA editing event in the nad7 transcript in mitochondria of Arabidopsis

scientific article published on 16 December 2009

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scholarly article

1 reference

Europe PubMed Central

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15 January 2020

MEF9, an E-subclass pentatricopeptide repeat protein, is required for an RNA editing event in the nad7 transcript in mitochondria of Arabidopsis (English)

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20018598%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

author name string

Mizuki Takenaka

1

1 reference

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15 January 2020

publication date

16 December 2009

1 reference

Europe PubMed Central

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15 January 2020

Plant Physiology

1 reference

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15 January 2020

152

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15 January 2020

2

1 reference

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15 January 2020

939-947

1 reference

Europe PubMed Central

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15 January 2020

The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L.): comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Arabidopsis gene YS1 encoding a DYW protein is required for editing of rpoB transcripts and the rapid development of chloroplasts during early growth.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Differential staining of aborted and nonaborted pollen

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The PPR motif - a TPR-related motif prevalent in plant organellar proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Involvement of a site-specific trans-acting factor and a common RNA-binding protein in the editing of chloroplast mRNAs: development of a chloroplast in vitro RNA editing system

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

One RNA polymerase serving two genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

cis Recognition elements in plant mitochondrion RNA editing

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recognition of RNA editing sites is directed by unique proteins in chloroplasts: biochemical identification of cis-acting elements and trans-acting factors involved in RNA editing in tobacco and pea chloroplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequences directing C to U editing of the plastid psbL mRNA are located within a 22 nucleotide segment spanning the editing site

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Lack of mitochondrial and nuclear-encoded subunits of complex I and alteration of the respiratory chain in Nicotiana sylvestris mitochondrial deletion mutants

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A pentatricopeptide repeat protein is essential for RNA editing in chloroplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An in vitro RNA editing system from cauliflower mitochondria: editing site recognition parameters can vary in different plant species

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA immunoprecipitation and microarray analysis show a chloroplast Pentatricopeptide repeat protein to be associated with the 5' region of mRNAs whose translation it activates

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dual targeting is the rule for organellar aminoacyl-tRNA synthetases in Arabidopsis thaliana.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA editing sites in plant mitochondria can share cis-elements

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA editing in plant organelles: machinery, physiological function and evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A simple in vitro RNA editing assay for chloroplast transcripts using fluorescent dideoxynucleotides: distinct types of sequence elements required for editing of ndh transcripts.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A pentatricopeptide repeat protein is a site recognition factor in chloroplast RNA editing.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conserved domain structure of pentatricopeptide repeat proteins involved in chloroplast RNA editing

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA editing in plant mitochondria: assays and biochemical approaches

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A hypothesis on the identification of the editing enzyme in plant organelles

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Pentatricopeptide repeat (PPR) proteins as sequence-specificity factors in post-transcriptional processes in organelles

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The pentatricopeptide repeat gene OTP43 is required for trans-splicing of the mitochondrial nad1 Intron 1 in Arabidopsis thaliana.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two RNA editing sites with cis-acting elements of moderate sequence identity are recognized by an identical site-recognition protein in tobacco chloroplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The process of RNA editing in plant mitochondria

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cross-competition in editing of chloroplast RNA transcripts in vitro implicates sharing of trans-factors between different C targets

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Organellar RNA editing and plant-specific extensions of pentatricopeptide repeat proteins in jungermanniid but not in marchantiid liverworts

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The pentatricopeptide repeat protein PPR5 stabilizes a specific tRNA precursor in maize chloroplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence-specific binding of a chloroplast pentatricopeptide repeat protein to its native group II intron ligand.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Seven large variations in the extent of RNA editing in plant mitochondria between three ecotypes of Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Amino acid sequence variations in Nicotiana CRR4 orthologs determine the species-specific efficiency of RNA editing in plastids

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Pentatricopeptide repeat proteins: a socket set for organelle gene expression.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CLB19, a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A conserved DYW domain of the pentatricopeptide repeat protein possesses a novel endoribonuclease activity

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Multiplex single-base extension typing to identify nuclear genes required for RNA editing in plant organelles

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Pentatricopeptide repeat proteins with the DYW motif have distinct molecular functions in RNA editing and RNA cleavage in Arabidopsis chloroplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A DYW domain-containing pentatricopeptide repeat protein is required for RNA editing at multiple sites in mitochondria of Arabidopsis thaliana.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A comparative genomics approach identifies a PPR-DYW protein that is essential for C-to-U editing of the Arabidopsis chloroplast accD transcript

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A trans-splicing group I intron and tRNA-hyperediting in the mitochondrial genome of the lycophyte Isoetes engelmannii

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rice OGR1 encodes a pentatricopeptide repeat-DYW protein and is essential for RNA editing in mitochondria.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

AtECB2, a pentatricopeptide repeat protein, is required for chloroplast transcript accD RNA editing and early chloroplast biogenesis in Arabidopsis thaliana.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The PPR protein encoded by the LOVASTATIN INSENSITIVE 1 gene is involved in RNA editing at three sites in mitochondria of Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/20018598

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1104/PP.109.151175

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20018598%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

0 references

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20018598%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

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