(Q43123523)

English

A comparative genomics approach identifies a PPR-DYW protein that is essential for C-to-U editing of the Arabidopsis chloroplast accD transcript

scientific article published on 24 April 2009

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

14 November 2017

A comparative genomics approach identifies a PPR-DYW protein that is essential for C-to-U editing of the Arabidopsis chloroplast accD transcript (English)

1 reference

Europe PubMed Central

PMC publication ID

14 November 2017

comparative genomics

1 reference

based on heuristic

inferred from title

2

1 reference

Europe PubMed Central

PMC publication ID

14 November 2017

3

1 reference

Europe PubMed Central

PMC publication ID

14 November 2017

author name string

John C Robbins

1

1 reference

Europe PubMed Central

PMC publication ID

14 November 2017

language of work or name

0 references

publication date

24 April 2009

1 reference

Europe PubMed Central

PMC publication ID

14 November 2017

1 reference

Europe PubMed Central

PMC publication ID

14 November 2017

15

1 reference

Europe PubMed Central

PMC publication ID

14 November 2017

6

1 reference

Europe PubMed Central

PMC publication ID

14 November 2017

1142-1153

1 reference

Europe PubMed Central

PMC publication ID

14 November 2017

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

1 reference

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Pentatricopeptide repeat proteins: a socket set for organelle gene expression.

1 reference

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Correlation between amino acid residues converted by RNA editing and functional residues in protein three-dimensional structures in plant organelles

1 reference

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25 May 2018

Cross-competition in editing of chloroplast RNA transcripts in vitro implicates sharing of trans-factors between different C targets

1 reference

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25 May 2018

A rapid high-throughput method for the detection and quantification of RNA editing based on high-resolution melting of amplicons

1 reference

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25 May 2018

Assay of editing of exogenous RNAs in chloroplast extracts of Arabidopsis, maize, pea, and tobacco

1 reference

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Genetic architecture of mitochondrial editing in Arabidopsis thaliana

1 reference

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25 May 2018

Conserved domain structure of pentatricopeptide repeat proteins involved in chloroplast RNA editing

1 reference

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The WiscDsLox T-DNA collection: an arabidopsis community resource generated by using an improved high-throughput T-DNA sequencing pipeline

1 reference

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25 May 2018

Identification of a sequence motif critical for editing of a tobacco chloroplast transcript

1 reference

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25 May 2018

POGs/PlantRBP: a resource for comparative genomics in plants

1 reference

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25 May 2018

An accurate fluorescent assay for quantifying the extent of RNA editing

1 reference

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25 May 2018

Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes

1 reference

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25 May 2018

RNA editing in plant organelles: machinery, physiological function and evolution

1 reference

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25 May 2018

Editing of plastid RNA in Arabidopsis thaliana ecotypes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2685521

25 May 2018

Substrate and cofactor requirements for RNA editing of chloroplast transcripts in Arabidopsis in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2685521

25 May 2018

A pentatricopeptide repeat protein is essential for RNA editing in chloroplasts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2685521

25 May 2018

GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox

1 reference

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25 May 2018

Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2685521

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Multifunctional acetyl-CoA carboxylase 1 is essential for very long chain fatty acid elongation and embryo development in Arabidopsis

1 reference

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CATMA: a complete Arabidopsis GST database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2685521

25 May 2018

Cross-competition in transgenic chloroplasts expressing single editing sites reveals shared cis elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2685521

25 May 2018

Transcript abundance supercedes editing efficiency as a factor in developmental variation of chloroplast gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2685521

25 May 2018

FLAGdb/FST: a database of mapped flanking insertion sites (FSTs) of Arabidopsis thaliana T-DNA transformants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2685521

25 May 2018

A single alteration 20 nt 5' to an editing target inhibits chloroplast RNA editing in vivo.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2685521

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Involvement of a site-specific trans-acting factor and a common RNA-binding protein in the editing of chloroplast mRNAs: development of a chloroplast in vitro RNA editing system

1 reference

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T-Coffee: A novel method for fast and accurate multiple sequence alignment

1 reference

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Sense from nonsense: how the genetic information of chloroplasts is altered by RNA editing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2685521

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The PPR motif - a TPR-related motif prevalent in plant organellar proteins

1 reference

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Removal of a cryptic intron and subcellular localization of green fluorescent protein are required to mark transgenic Arabidopsis plants brightly

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Multi-functional acetyl-CoA carboxylase from Brassica napus is encoded by a multi-gene family: indication for plastidic localization of at least one isoform

1 reference

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Sequences directing C to U editing of the plastid psbL mRNA are located within a 22 nucleotide segment spanning the editing site

1 reference

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On the evolution of RNA editing

1 reference

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RNA editing in wheat mitochondria results in the conservation of protein sequences

1 reference

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A termination codon is created by RNA editing in the petunia atp9 transcript

1 reference

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RNA editing in tobacco chloroplasts leads to the formation of a translatable psbL mRNA by a C to U substitution within the initiation codon

1 reference

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The Arabidopsis gene YS1 encoding a DYW protein is required for editing of rpoB transcripts and the rapid development of chloroplasts during early growth.

1 reference

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A conserved DYW domain of the pentatricopeptide repeat protein possesses a novel endoribonuclease activity

1 reference

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High conservation of a 5' element required for RNA editing of a C target in chloroplast psbE transcripts

1 reference

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CLB19, a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts.

1 reference

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Plastid transcriptomics and translatomics of tomato fruit development and chloroplast-to-chromoplast differentiation: chromoplast gene expression largely serves the production of a single protein.

1 reference

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PPR336 is associated with polysomes in plant mitochondria

1 reference

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A pentatricopeptide repeat protein is a site recognition factor in chloroplast RNA editing.

1 reference

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1 reference

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RNA editing sites in plant mitochondria can share cis-elements

1 reference

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The tobacco plastid accD gene is essential and is required for leaf development.

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Chloroplast RNA editing required for functional acetyl-CoA carboxylase in plants

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Ecotype allelic variation in C-to-U editing extent of a mitochondrial transcript identifies RNA-editing quantitative trait loci in Arabidopsis

1 reference

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based on heuristic

inferred from PubMed ID database lookup

The evolution of chloroplast RNA editing

1 reference

https://pubmed.ncbi.nlm.nih.gov/19395655

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Seven large variations in the extent of RNA editing in plant mitochondria between three ecotypes of Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/19395655

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based on heuristic

inferred from PubMed ID database lookup

Conservation of RNA editing between rice and maize plastids: are most editing events dispensable?

1 reference

https://pubmed.ncbi.nlm.nih.gov/19395655

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based on heuristic

inferred from PubMed ID database lookup

Comparative analysis of RNA editing sites in higher plant chloroplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/19395655

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based on heuristic

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A nucleus-encoded factor, CRR2, is essential for the expression of chloroplast ndhB in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19395655

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Acetyl-CoA carboxylase in higher plants: most plants other than gramineae have both the prokaryotic and the eukaryotic forms of this enzyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/19395655

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1261/RNA.1533909

1 reference

Europe PubMed Central

PMC publication ID

14 November 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 November 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 November 2017

ResearchGate publication ID

0 references

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