(Q82538223)

English

The complete mitochondrial genome of the entomopathogenic nematode Steinernema carpocapsae: insights into nematode mitochondrial DNA evolution and phylogeny

scientific article published on 10 February 2006

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scholarly article

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16474981%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

The complete mitochondrial genome of the entomopathogenic nematode Steinernema carpocapsae: insights into nematode mitochondrial DNA evolution and phylogeny (English)

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16474981%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

entomopathogenic nematode

1 reference

based on heuristic

inferred from title

Steinernema carpocapsae

object named as

Steinernema carpocapsae

1 reference

based on heuristic

inferred from title

1

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16474981%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

4

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16474981%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

author name string

Miguel A Lucena

2

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16474981%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

Jorge Medeiros

3

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16474981%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

publication date

10 February 2006

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16474981%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

Journal of Molecular Evolution

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16474981%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

62

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16474981%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

2

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16474981%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

211-225

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16474981%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

https://scigraph.springernature.com/pub.10.1007/s00239-005-0072-9

0 references

DCSE, an interactive tool for sequence alignment and secondary structure research

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High direct estimate of the mutation rate in the mitochondrial genome of Caenorhabditis elegans.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Repair of tRNAs in metazoan mitochondria

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A unique serine-specific elongation factor Tu found in nematode mitochondria

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The mitochondrial genome of Strongyloides stercoralis (Nematoda) - idiosyncratic gene order and evolutionary implications

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A compilation of large subunit (23S and 23S-like) ribosomal RNA structures: 1993

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Polyadenylation creates the discriminator nucleotide of chicken mitochondrial tRNA(Tyr).

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bizarre tRNAs inferred from DNA sequences of mitochondrial genomes of nematode worms

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

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Control of insect pests with entomopathogenic nematodes: the impact of molecular biology and phylogenetic reconstruction

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mitochondrial DNA modifies cognition in interaction with the nuclear genome and age in mice

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A novel type of RNA editing occurs in the mitochondrial tRNAs of the centipede Lithobius forficatus

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Why mitochondrial genes are most often found in nuclei.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An "elongated" translation elongation factor Tu for truncated tRNAs in nematode mitochondria

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutation accumulation in transfer RNAs: molecular evidence for Muller's ratchet in mitochondrial genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phylogenetics in Caenorhabditis elegans: an analysis of divergence and outcrossing

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-scale evolution: reconstructing gene orders in the ancestral species.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mitochondrial DNA--related mitochondrial dysfunction in neurodegenerative diseases

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

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A transcriptomic analysis of the phylum Nematoda

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A molecular evolutionary framework for the phylum Nematoda

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure and organization of the mitochondrial genome of the canine heartworm, Dirofilaria immitis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

GRIMM: genome rearrangements web server

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

OGRe: a relational database for comparative analysis of mitochondrial genomes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

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THE RELATION OF RECOMBINATION TO MUTATIONAL ADVANCE

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

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ProtTest: selection of best-fit models of protein evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A combination of three common inherited mitochondrial DNA polymorphisms promotes longevity in Finnish and Japanese subjects

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Animal mitochondrial genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

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The early history of modern birds inferred from DNA sequences of nuclear and mitochondrial ribosomal genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

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Evolutionary genomics in Metazoa: the mitochondrial DNA as a model system

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

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Simple methods for testing the molecular evolutionary clock hypothesis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

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A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Assessing the relative rate of (mitochondrial) genomic change

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cytonuclear genomic dissociation in African elephant species

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

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The mitochondrial genome of Onchocerca volvulus: sequence, structure and phylogenetic analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

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MODELTEST: testing the model of DNA substitution

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A set of tRNAs that lack either the T psi C arm or the dihydrouridine arm: towards a minimal tRNA adaptor.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Database on the structure of small ribosomal subunit RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

mtDNA mutations increase tumorigenicity in prostate cancer

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Divergence of mitochondrial dna is not corroborated by nuclear dna, morphology, or behavior in Drosophila simulans

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transfer RNA editing in land snail mitochondria

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The European Large Subunit Ribosomal RNA Database

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Low, but strongly structured mitochondrial DNA diversity in root knot nematodes (Meloidogyne)

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MEGA2: molecular evolutionary genetics analysis software

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Congruent Mammalian Trees from Mitochondrial and Nuclear Genes Using Bayesian Methods

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RevTrans: Multiple alignment of coding DNA from aligned amino acid sequences.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The incomplete natural history of mitochondria

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Heart denaturation studies of rat liver mitrochondrial DNA. A denaturation map and changes in molecular configurations

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mitochondrial DNA in metazoa: degree of freedom in a frozen event

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA editing in metazoan mitochondria: staying fit without sex.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Trichinella spiralis mtDNA: a nematode mitochondrial genome that encodes a putative ATP8 and normally structured tRNAS and has a gene arrangement relatable to those of coelomate metazoans

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The mitochondrial genomes of the human hookworms, Ancylostoma duodenale and Necator americanus (Nematoda: Secernentea).

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

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The mitochondrial ribosomal RNA genes of the nematodes Caenorhabditis elegans and Ascaris suum: consensus secondary-structure models and conserved nucleotide sets for phylogenetic analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The mitochondrial genomes of two nematodes, Caenorhabditis elegans and Ascaris suum

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MRBAYES: Bayesian inference of phylogenetic trees

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plastid genome phylogeny and a model of amino acid substitution for proteins encoded by chloroplast DNA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolutionary history of Caenorhabditis elegans inferred from microsatellites: evidence for spatial and temporal genetic differentiation and the occurrence of outbreeding

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Model of amino acid substitution in proteins encoded by mitochondrial DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Collection of small subunit (16S- and 16S-like) ribosomal RNA structures: 1994

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Life cycle variation and the genetic structure of nematode populations

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Database on the structure of large subunit ribosomal RNA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mfold web server for nucleic acid folding and hybridization prediction

1 reference

https://pubmed.ncbi.nlm.nih.gov/16474981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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