(Q82869423)

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Minimization of genetic distances by the consensus, ancestral, and center-of-tree (COT) sequences for HIV-1 variants within an infected individual and the design of reagents to test immune reactivity

scientific article published on 20 March 2006

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18 January 2020

Minimization of genetic distances by the consensus, ancestral, and center-of-tree (COT) sequences for HIV-1 variants within an infected individual and the design of reagents to test immune reactivity (English)

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18 January 2020

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Girish S Kesturu

1

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18 January 2020

Bonnie A Colleton

2

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18 January 2020

Yi Liu

3

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18 January 2020

Laura Heath

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18 January 2020

Obaid Shakil Shaikh

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18 January 2020

Charles R Rinaldo

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18 January 2020

Raj Shankarappa

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18 January 2020

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20 March 2006

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18 January 2020

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18 January 2020

348

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18 January 2020

2

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18 January 2020

437-448

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18 January 2020

Comprehensive epitope analysis of human immunodeficiency virus type 1 (HIV-1)-specific T-cell responses directed against the entire expressed HIV-1 genome demonstrate broadly directed responses, but no correlation to viral load.

1 reference

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Viral quasispecies.

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Consistent cytotoxic-T-lymphocyte targeting of immunodominant regions in human immunodeficiency virus across multiple ethnicities

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Substantial differences in specificity of HIV-specific cytotoxic T cells in acute and chronic HIV infection

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Human immunodeficiency virus type 1 env evolves toward ancestral states upon transmission to a new host.

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Rapid turnover of plasma virions and CD4 lymphocytes in HIV-1 infection

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Priming of human immunodeficiency virus type 1 (HIV-1)-specific CD8+ T cell responses by dendritic cells loaded with HIV-1 proteins

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Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences

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The Multicenter AIDS Cohort Study: rationale, organization, and selected characteristics of the participants.

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Comprehensive analysis of human immunodeficiency virus type 1-specific CD4 responses reveals marked immunodominance of gag and nef and the presence of broadly recognized peptides

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7 January 2021

Clustered mutations in HIV-1 gag are consistently required for escape from HLA-B27-restricted cytotoxic T lymphocyte responses.

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MEGA2: molecular evolutionary genetics analysis software

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Virus population homogenization following acute human immunodeficiency virus type 1 infection

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Immunogen sequence: the fourth tier of AIDS vaccine design

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7 January 2021

Evolutionary indicators of human immunodeficiency virus type 1 reservoirs and compartments

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7 January 2021

Importance and detection of virus reservoirs and compartments of HIV infection

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7 January 2021

Human immunodeficiency virus type 1 subtype C molecular phylogeny: consensus sequence for an AIDS vaccine design?

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7 January 2021

Acute phase cytotoxic T lymphocyte escape is a hallmark of simian immunodeficiency virus infection

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7 January 2021

Broad spectrum of in vivo forward mutations, hypermutations, and mutational hotspots in a retroviral shuttle vector after a single replication cycle: deletions and deletions with insertions

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7 January 2021

Broad spectrum of in vivo forward mutations, hypermutations, and mutational hotspots in a retroviral shuttle vector after a single replication cycle: substitutions, frameshifts, and hypermutations

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7 January 2021

Anti-HIV type 1 memory cytotoxic T lymphocyte responses associated with changes in CD4+ T cell numbers in progression of HIV type 1 infection

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7 January 2021

The accuracy of reverse transcriptase from HIV-1.

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Immune-mediated positive selection drives human immunodeficiency virus type 1 molecular variation and predicts disease duration.

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Influence of random genetic drift on human immunodeficiency virus type 1 env evolution during chronic infection

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Macrophage-tropic variants initiate human immunodeficiency virus type 1 infection after sexual, parenteral, and vertical transmission

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1 reference

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Reevaluation of amino acid variability of the human immunodeficiency virus type 1 gp120 envelope glycoprotein and prediction of new discontinuous epitopes

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7 January 2021

Consistent patterns in the development and immunodominance of human immunodeficiency virus type 1 (HIV-1)-specific CD8+ T-cell responses following acute HIV-1 infection

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7 January 2021

Clustering patterns of cytotoxic T-lymphocyte epitopes in human immunodeficiency virus type 1 (HIV-1) proteins reveal imprints of immune evasion on HIV-1 global variation

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10.1016/J.VIROL.2005.11.055

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16545415%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

PubMed publication ID

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16545415%20AND%20SRC:MED&resulttype=core&format=json

18 January 2020

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