(Q83194497)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22227891%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

title

Pericentromeric effects shape the patterns of divergence, retention, and expression of duplicated genes in the paleopolyploid soybean (English)

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19 January 2020

4

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19 January 2020

author name string

Jianchang Du

1

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19 January 2020

Zhixi Tian

2

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19 January 2020

Yi Sui

3

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19 January 2020

Qijian Song

5

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19 January 2020

Steven B Cannon

6

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19 January 2020

Perry Cregan

7

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19 January 2020

Jianxin Ma

8

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19 January 2020

publication date

6 January 2012

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19 January 2020

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19 January 2020

volume

24

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19 January 2020

issue

1

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19 January 2020

page(s)

21-32

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Preservation of duplicate genes by complementary, degenerative mutations

19 January 2020

cites work

1 reference

12 December 2020

Modeling gene and genome duplications in eukaryotes

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12 December 2020

The effect of linkage on limits to artificial selection

1 reference

12 December 2020

The gene balance hypothesis: from classical genetics to modern genomics

1 reference

12 December 2020

Histone modification levels are predictive for gene expression

1 reference

12 December 2020

Centromeric heterochromatin comes clean with DNA methylation

1 reference

12 December 2020

Mechanisms of recent genome size variation in flowering plants

1 reference

12 December 2020

Yesterday's polyploids and the mystery of diploidization

1 reference

12 December 2020

Many or most genes in Arabidopsis transposed after the origin of the order Brassicales

1 reference

12 December 2020

Conservation and purifying selection of transcribed genes located in a rice centromere

1 reference

12 December 2020

Do genetic recombination and gene density shape the pattern of DNA elimination in rice long terminal repeat retrotransposons?

1 reference

12 December 2020

Mutation patterns in the human genome: more variable than expected

1 reference

12 December 2020

Consequences of genome duplication

1 reference

12 December 2020

Duplicated genes evolve slower than singletons despite the initial rate increase

1 reference

12 December 2020

Structural and functional divergence of a 1-Mb duplicated region in the soybean (Glycine max) genome and comparison to an orthologous region from Phaseolus vulgaris

1 reference

12 December 2020

Epigenetic silencing of transposable elements: a trade-off between reduced transposition and deleterious effects on neighboring gene expression

1 reference

12 December 2020

Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes

1 reference

12 December 2020

Sequence conservation of homeologous bacterial artificial chromosomes and transcription of homeologous genes in soybean (Glycine max L. Merr.).

1 reference

12 December 2020

Dating the origins of polyploidy events

1 reference

12 December 2020

Rapid evolution of expression and regulatory divergences after yeast gene duplication

1 reference

12 December 2020

Histone H3K4 methylation keeps centromeres open for business

1 reference

12 December 2020

Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss

1 reference

12 December 2020

Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster

1 reference

12 December 2020

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

1 reference

12 December 2020

Circos: an information aesthetic for comparative genomics

1 reference

12 December 2020

Meiotic recombination between paralogous RBCSB genes on sister chromatids of Arabidopsis thaliana

1 reference

12 December 2020

The evolutionary position of subfunctionalization, downgraded

1 reference

12 December 2020

Ancestral polyploidy in seed plants and angiosperms

1 reference

12 December 2020

Whole-genome sequencing and intensive analysis of the undomesticated soybean (Glycine soja Sieb. and Zucc.) genome

1 reference

12 December 2020

The influence of recombination on human genetic diversity

1 reference

12 December 2020

Changes in twelve homoeologous genomic regions in soybean following three rounds of polyploidy

1 reference

12 December 2020

Genome duplication and the origin of angiosperms

1 reference

12 December 2020

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

1 reference

12 December 2020

PAML 4: phylogenetic analysis by maximum likelihood

1 reference

12 December 2020

Polyploidy: recurrent formation and genome evolution

1 reference

12 December 2020

Duplicate genes increase expression diversity in closely related species and allopolyploids

1 reference

12 December 2020

Highly integrated single-base resolution maps of the epigenome in Arabidopsis

1 reference

12 December 2020

Mining EST databases to resolve evolutionary events in major crop species

1 reference

12 December 2020

The Ka/Ks ratio: diagnosing the form of sequence evolution

1 reference

12 December 2020

Mutation rate variation in multicellular eukaryotes: causes and consequences

1 reference

12 December 2020

Factors that contribute to variation in evolutionary rate among Arabidopsis genes

1 reference

12 December 2020

Human SNP variability and mutation rate are higher in regions of high recombination

1 reference

12 December 2020

High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence

1 reference

12 December 2020

SoyDB: a knowledge database of soybean transcription factors

1 reference

12 December 2020

Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection

1 reference

12 December 2020

Does lack of recombination enhance asymmetric evolution among duplicate genes? Insights from the Drosophila melanogaster genome.

1 reference

12 December 2020

Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome

1 reference

12 December 2020

Rate of protein evolution versus fitness effect of gene deletion.

1 reference

12 December 2020

Molecular evolution meets the genomics revolution

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12 December 2020

Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes

1 reference

12 December 2020

Genome sequence of the palaeopolyploid soybean

1 reference

12 December 2020

Following tetraploidy in an Arabidopsis ancestor, genes were removed preferentially from one homeolog leaving clusters enriched in dose-sensitive genes

1 reference

12 December 2020

MareyMap: an R-based tool with graphical interface for estimating recombination rates

1 reference

12 December 2020

The probability of duplicate gene preservation by subfunctionalization

1 reference

12 December 2020

The role of hybridization in plant speciation

1 reference

12 December 2020

How often do duplicated genes evolve new functions?

1 reference

12 December 2020

Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole-genome tiling arrays

1 reference

12 December 2020

Genome duplication led to highly selective expansion of the Arabidopsis thaliana proteome.

1 reference

12 December 2020

Close split of sorghum and maize genome progenitors

1 reference

12 December 2020

Mutation rate variation in the mammalian genome

1 reference

12 December 2020

Molecular and chromosomal evidence for allopolyploidy in soybean

1 reference

12 December 2020

Cellular reactions to gene dosage imbalance: genomic, transcriptomic and proteomic effects

1 reference

12 December 2020

The evolutionary fate and consequences of duplicate genes

1 reference

12 December 2020

The origins of genome complexity

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12 December 2020

Hearing silence: non-neutral evolution at synonymous sites in mammals

1 reference

12 December 2020

Selection in the evolution of gene duplications

1 reference

12 December 2020

Evolutionary Rate at the Molecular Level

1 reference

12 December 2020

Recombination: an underappreciated factor in the evolution of plant genomes

1 reference

12 December 2020

SoyTEdb: a comprehensive database of transposable elements in the soybean genome

1 reference

12 December 2020

Dated molecular phylogenies indicate a Miocene origin for Arabidopsis thaliana

1 reference

12 December 2020

Preferential duplication of conserved proteins in eukaryotic genomes

1 reference

12 December 2020

Gene complexity and gene duplicability

1 reference

12 December 2020

Polyploid Incidence and Evolution

1 reference

12 December 2020

Following tetraploidy in maize, a short deletion mechanism removed genes preferentially from one of the two homologs.

1 reference

12 December 2020

An integrated transcriptome atlas of the crop model Glycine max, and its use in comparative analyses in plants

1 reference

12 December 2020

Genome evolution in polyploids

1 reference

12 December 2020

The dual nature of homologous recombination in plants

1 reference

12 December 2020

Identifiers

DOI

10.1105/TPC.111.092759

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22227891%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

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