(Q83727550)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21441435%20AND%20SRC:MED&resulttype=core&format=json

26 January 2020

title

The predicted Arabidopsis interactome resource and network topology-based systems biology analyses (English)

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26 January 2020

1

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26 January 2020

author name string

Xi Zhou

2

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26 January 2020

Xueling Shen

3

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26 January 2020

Chuanzao Mao

4

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26 January 2020

Xin Chen

5

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26 January 2020

publication date

25 March 2011

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26 January 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21441435%20AND%20SRC:MED&resulttype=core&format=json

26 January 2020

volume

23

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26 January 2020

issue

3

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26 January 2020

page(s)

911-922

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Creative Commons Attribution 4.0 International

26 January 2020

copyright license

start time

19 January 2021

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

CIA2 coordinately up-regulates protein import and synthesis in leaf chloroplasts

1 reference

12 December 2020

Effect of Arabidopsis COP10 ubiquitin E2 enhancement activity across E2 families and functional conservation among its canonical homologues.

1 reference

12 December 2020

A global pathway crosstalk network

1 reference

12 December 2020

Characterization of NtCDPK1, a calcium-dependent protein kinase gene in Nicotiana tabacum, and the activity of its encoded protein

1 reference

12 December 2020

Functional organization of the yeast proteome by systematic analysis of protein complexes

1 reference

12 December 2020

ONE-CARBON METABOLISM IN HIGHER PLANTS.

1 reference

12 December 2020

NPR1 modulates cross-talk between salicylate- and jasmonate-dependent defense pathways through a novel function in the cytosol

1 reference

12 December 2020

ATTED-II provides coexpressed gene networks for Arabidopsis

1 reference

12 December 2020

Comparing classical pathways and modern networks: towards the development of an edge ontology

1 reference

12 December 2020

The Arabidopsis thaliana response regulator ARR22 is a putative AHP phospho-histidine phosphatase expressed in the chalaza of developing seeds

1 reference

12 December 2020

DNA replication factor C1 mediates genomic stability and transcriptional gene silencing in Arabidopsis

1 reference

12 December 2020

An F-box gene, CPR30, functions as a negative regulator of the defense response in Arabidopsis

1 reference

12 December 2020

The Arabidopsis cytochrome P450 CYP86A1 encodes a fatty acid omega-hydroxylase involved in suberin monomer biosynthesis

1 reference

12 December 2020

Modular organization of cellular networks

1 reference

12 December 2020

Where have all the interactions gone? Estimating the coverage of two-hybrid protein interaction maps

1 reference

12 December 2020

The DDB1a interacting proteins ATCSA-1 and DDB2 are critical factors for UV-B tolerance and genomic integrity in Arabidopsis thaliana

1 reference

12 December 2020

A map of the interactome network of the metazoan C. elegans

1 reference

12 December 2020

The Arabidopsis LUT1 locus encodes a member of the cytochrome p450 family that is required for carotenoid epsilon-ring hydroxylation activity

1 reference

12 December 2020

The transcript elongation factor FACT affects Arabidopsis vegetative and reproductive development and genetically interacts with HUB1/2.

1 reference

12 December 2020

Arabidopsis cytochrome P450s that catalyze the first step of tryptophan-dependent indole-3-acetic acid biosynthesis

1 reference

12 December 2020

Locally defined protein phylogenetic profiles reveal previously missed protein interactions and functional relationships

1 reference

12 December 2020

Jasmonate is essential for insect defense in Arabidopsis

1 reference

12 December 2020

Discovering regulatory and signalling circuits in molecular interaction networks

1 reference

12 December 2020

Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses

1 reference

12 December 2020

An Arabidopsis flavonoid transporter is required for anther dehiscence and pollen development

1 reference

12 December 2020

BioGRID: a general repository for interaction datasets

1 reference

12 December 2020

Towards a proteome-scale map of the human protein–protein interaction network

1 reference

12 December 2020

Glucosinolate metabolism and its control

1 reference

12 December 2020

AtPID: Arabidopsis thaliana protein interactome database--an integrative platform for plant systems biology

1 reference

12 December 2020

Protein interaction mapping: a Drosophila case study

1 reference

12 December 2020

Arabidopsis auxin mutants are compromised in systemic acquired resistance and exhibit aberrant accumulation of various indolic compounds

1 reference

12 December 2020

Compilation and characterization of Arabidopsis thaliana response regulators implicated in His-Asp phosphorelay signal transduction

1 reference

12 December 2020

Defining the primary route for lutein synthesis in plants: the role of Arabidopsis carotenoid beta-ring hydroxylase CYP97A3

1 reference

12 December 2020

Coevolution of gene expression among interacting proteins

1 reference

12 December 2020

Glucosinolate metabolites required for an Arabidopsis innate immune response

1 reference

12 December 2020

Biosynthesis and metabolism of brassinosteroids

1 reference

12 December 2020

Mapping Gene Ontology to proteins based on protein-protein interaction data

1 reference

12 December 2020

Flavonoid biosynthesis. A colorful model for genetics, biochemistry, cell biology, and biotechnology

1 reference

12 December 2020

The cytochrome P450 enzyme CYP96A15 is the midchain alkane hydroxylase responsible for formation of secondary alcohols and ketones in stem cuticular wax of Arabidopsis.

1 reference

12 December 2020

GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes

1 reference

12 December 2020

Whole-proteome prediction of protein function via graph-theoretic analysis of interaction maps

1 reference

12 December 2020

Network-based classification of breast cancer metastasis

1 reference

12 December 2020

An automated method for finding molecular complexes in large protein interaction networks

1 reference

12 December 2020

NASCArrays: a repository for microarray data generated by NASC's transcriptomics service

1 reference

12 December 2020

Conservation and coevolution in the scale-free human gene coexpression network

1 reference

12 December 2020

In planta changes in protein phosphorylation induced by the plant hormone abscisic acid

1 reference

12 December 2020

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

1 reference

12 December 2020

Annotating genes of known and unknown function by large-scale coexpression analysis

1 reference

12 December 2020

High-quality binary protein interaction map of the yeast interactome network

1 reference

12 December 2020

Mapping plant interactomes using literature curated and predicted protein-protein interaction data sets

1 reference

12 December 2020

Global protein function prediction from protein-protein interaction networks

1 reference

12 December 2020

AraCyc: a biochemical pathway database for Arabidopsis

1 reference

12 December 2020

Coordination of cell proliferation and cell expansion mediated by ribosome-related processes in the leaves of Arabidopsis thaliana.

1 reference

12 December 2020

The ethylene signaling pathway

1 reference

12 December 2020

Network-based prediction of protein function

1 reference

12 December 2020

POFs: what we don't know can hurt us

1 reference

12 December 2020

PAIR: the predicted Arabidopsis interactome resource

1 reference

12 December 2020

CDPKs - a kinase for every Ca2+ signal?

1 reference

12 December 2020

Network inference, analysis, and modeling in systems biology.

1 reference

12 December 2020

Unraveling transcriptional control in Arabidopsis using cis-regulatory elements and coexpression networks

1 reference

12 December 2020

Exploiting indirect neighbours and topological weight to predict protein function from protein-protein interactions

1 reference

12 December 2020

Cloning, molecular and functional characterization of Arabidopsis thaliana allene oxide synthase (CYP 74), the first enzyme of the octadecanoid pathway to jasmonates

1 reference

12 December 2020

The Biomolecular Interaction Network Database and related tools 2005 update

1 reference

12 December 2020

Fatty acid hydroperoxide lyase: a plant cytochrome p450 enzyme involved in wound healing and pest resistance

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12 December 2020

A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

1 reference

12 December 2020

An efficient algorithm for large-scale detection of protein families

1 reference

12 December 2020

A predicted interactome for Arabidopsis.

1 reference

12 December 2020

Gene module level analysis: identification to networks and dynamics

1 reference

12 December 2020

Getting to grips with the plant metabolic network

1 reference

12 December 2020

Arabidopsis systemic immunity uses conserved defense signaling pathways and is mediated by jasmonates.

1 reference

12 December 2020

Characterization of the Arabidopsis TU8 glucosinolate mutation, an allele of TERMINAL FLOWER2.

1 reference

12 December 2020

The chromatin remodelling complex FACT associates with actively transcribed regions of the Arabidopsis genome

1 reference

12 December 2020

The IntAct molecular interaction database in 2010

1 reference

12 December 2020

The language of calcium signaling

1 reference

12 December 2020

A human protein-protein interaction network: a resource for annotating the proteome

1 reference

12 December 2020

Emergent behavior of growing knowledge about molecular interactions.

1 reference

12 December 2020

AtPIN: Arabidopsis thaliana protein interaction network

1 reference

12 December 2020

On the growth of scientific knowledge: yeast biology as a case study

1 reference

12 December 2020

AtIPT3 is a key determinant of nitrate-dependent cytokinin biosynthesis in Arabidopsis.

1 reference

12 December 2020

From molecular to modular cell biology

1 reference

12 December 2020

The involvement of two p450 enzymes, CYP83B1 and CYP83A1, in auxin homeostasis and glucosinolate biosynthesis

1 reference

12 December 2020

The last reaction producing brassinolide is catalyzed by cytochrome P-450s, CYP85A3 in tomato and CYP85A2 in Arabidopsis

1 reference

12 December 2020

The AtGenExpress hormone and chemical treatment data set: experimental design, data evaluation, model data analysis and data access

1 reference

12 December 2020

What makes species unique? The contribution of proteins with obscure features

1 reference

12 December 2020

The role of the transcript elongation factors FACT and HUB1 in leaf growth and the induction of flowering

1 reference

12 December 2020

Toward a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins

1 reference

12 December 2020

GO-At: in silico prediction of gene function in Arabidopsis thaliana by combining heterogeneous data

1 reference

12 December 2020

Plant hormones and signaling: common themes and new developments

1 reference

12 December 2020

Predicting protein-protein interactions in Arabidopsis thaliana through integration of orthology, gene ontology and co-expression

1 reference

12 December 2020

Computational identification of potential molecular interactions in Arabidopsis

1 reference

12 December 2020

Biological process linkage networks

1 reference

12 December 2020

Functional classification of proteins for the prediction of cellular function from a protein-protein interaction network

1 reference

12 December 2020

Cytochrome P450 monooxygenases as reporters for circadian-regulated pathways

1 reference

12 December 2020

The Arabidopsis Information Resource (TAIR): gene structure and function annotation.

1 reference

12 December 2020