(Q83921204)

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GC content evolution of the human and mouse genomes: insights from the study of processed pseudogenes in regions of different recombination rates

scientific article published on 28 April 2006

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16752212%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

GC content evolution of the human and mouse genomes: insights from the study of processed pseudogenes in regions of different recombination rates (English)

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16752212%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

3

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16752212%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

author name string

Adel Khelifi

1

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16752212%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

Julien Meunier

2

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16752212%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

Dominique Mouchiroud

4

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16752212%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

publication date

28 April 2006

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16752212%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

Journal of Molecular Evolution

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16752212%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

62

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16752212%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

6

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16752212%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

745-752

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16752212%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution

1 reference

https://api.crossref.org/works/10.1007%2FS00239-005-0186-0

21 January 2018

Local Rates of Recombination Are Positively Correlated with GC Content in the Human Genome

1 reference

https://api.crossref.org/works/10.1007%2FS00239-005-0186-0

21 January 2018

Absence of the TAP2 human recombination hotspot in chimpanzees

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Compositional constraints and genome evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Compositional evolution of noncoding DNA in the human and chimpanzee genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recombination has little effect on the rate of sequence divergence in pseudoautosomal boundary 1 among humans and great apes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA methylation and the frequency of CpG in animal DNA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Human LINE retrotransposons generate processed pseudogenes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutation rates differ among regions of the mammalian genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HOVERGEN: a database of homologous vertebrate genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recombination drives the evolution of GC-content in the human genome.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolution of a large population under gene conversion

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A graphical representation of genetic and physical maps: The Marey map

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

How strong is the mutagenicity of recombination in mammals?

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The properties of meiotic gene conversion important in its effects on evolution.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Efficient repair of all types of single-base mismatches in recombination intermediates in Chinese hamster ovary cells. Competition between long-patch and G-T glycosylase-mediated repair of G-T mismatches

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The fine-scale structure of recombination rate variation in the human genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High mutation rates in human and ape pseudoautosomal genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Where the crossovers are: recombination distributions in mammals.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reciprocal crossover asymmetry and meiotic drive in a human recombination hot spot.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A comprehensive genetic map of the mouse genome.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recombination, GC-content and the human pseudoautosomal boundary paradox

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Deterministic mutation rate variation in the human genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Compositional properties of coding sequences and mammalian phylogeny

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HOPPSIGEN: a database of human and mouse processed pseudogenes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Linkage disequilibrium patterns across a recombination gradient in African Drosophila melanogaster

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High codon-usage changes in mammalian genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isochores result from mutation not selection

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Using analytical ultracentrifugation to study compositional variation in vertebrate genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromosomal location effects on gene sequence evolution in mammals

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Human SNP variability and mutation rate are higher in regions of high recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

GC-content evolution in mammalian genomes: the biased gene conversion hypothesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Processed pseudogenes: characteristics and evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The decline of isochores in mammals: an assessment of the GC content variation along the mammalian phylogeny

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The compositional distribution of coding sequences and DNA molecules in humans and murids

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The evolution of isochores

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for widespread degradation of gene control regions in hominid genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vanishing GC-rich isochores in mammalian genomes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene conversion drives GC content evolution in mammalian histones

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence of selection on silent site base composition in mammals: potential implications for the evolution of isochores and junk DNA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Male-driven biased gene conversion governs the evolution of base composition in human alu repeats.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Patterns of nucleotide substitution, insertion and deletion in the human genome inferred from pseudogenes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Integrated databanks access and sequence/structure analysis services at the PBIL.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Initial sequencing and comparative analysis of the mouse genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MGD: the Mouse Genome Database

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Low nucleotide diversity in chimpanzees and bonobos

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vertebrate pseudogenes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene conversion and GC-content evolution in mammalian Hsp70.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Differences in crossover frequency and distribution among three sibling species of Drosophila.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recombination explains isochores in mammalian genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Neutral Substitutions Occur at a Faster Rate in Exons Than in Noncoding DNA in Primate Genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutation pattern variation among regions of the primate genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A high-resolution recombination map of the human genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic recombination. Patterns in the genome.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Divergence time and population size in the lineage leading to modern humans

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The mosaic genome of warm-blooded vertebrates

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Length distribution of long interspersed nucleotide elements (LINEs) and processed pseudogenes of human endogenous retroviruses: implications for retrotransposition and pseudogene detection

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Distinct changes of genomic biases in nucleotide substitution at the time of Mammalian radiation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Worldwide DNA sequence variation in a 10-kilobase noncoding region on human chromosome 22

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biased gene conversion: implications for genome and sex evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative recombination rates in the rat, mouse, and human genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Estimating the rate of gene conversion on human chromosome 21.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The compositional evolution of vertebrate genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recombination and mammalian genome evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Different base/base mispairs are corrected with different efficiencies and specificities in monkey kidney cells.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA sequence evolution with neighbor-dependent mutation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Initial sequencing and analysis of the human genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interactions between natural selection, recombination and gene density in the genes of Drosophila.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

1 reference

https://pubmed.ncbi.nlm.nih.gov/16752212

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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