(Q84316295)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31911390%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

title

Analysis of preferred codon usage in the coronavirus N genes and their implications for genome evolution and vaccine design (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31911390%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

1 reference

1 reference

2

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29 April 2020

Mahmoud Kandeel

5

1 reference

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29 April 2020

author name string

Abdullah Sheikh

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31911390%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

Mohammed Al-Nazawi

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31911390%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

Abdullah I Al-Mubarak

4

1 reference

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29 April 2020

publication date

5 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31911390%20AND%20SRC:MED&resulttype=core&format=json

Journal of Virological Methods

29 April 2020

published in

1 reference

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29 April 2020

volume

277

1 reference

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29 April 2020

page(s)

113806

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31911390%20AND%20SRC:MED&resulttype=core&format=json

Evolution of codon usage patterns: the extent and nature of divergence between Candida albicans and Saccharomyces cerevisiae

29 April 2020

cites work

1 reference

12 December 2020

The rate of synonymous substitution in enterobacterial genes is inversely related to codon usage bias

1 reference

12 December 2020

Directional mutation pressure and neutral molecular evolution

1 reference

12 December 2020

Codon usage and tRNA content in unicellular and multicellular organisms

1 reference

12 December 2020

Codon usage: mutational bias, translational selection, or both?

1 reference

12 December 2020

The transmissible gastroenteritis coronavirus contains a spherical core shell consisting of M and N proteins

1 reference

12 December 2020

Protection of cats from infectious peritonitis by vaccination with a recombinant raccoon poxvirus expressing the nucleocapsid gene of feline infectious peritonitis virus.

1 reference

12 December 2020

You are what you eat: a gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes.

1 reference

12 December 2020

Codon usage tabulated from international DNA sequence databases: status for the year 2000

1 reference

12 December 2020

Lateral gene transfer and the nature of bacterial innovation

1 reference

12 December 2020

Correspondence analysis applied to microarray data

1 reference

12 December 2020

Analysis of codon usage diversity of bacterial genes with a self-organizing map (SOM): characterization of horizontally transferred genes with emphasis on the E. coli O157 genome

1 reference

12 December 2020

On the evolution of cells

1 reference

12 December 2020

Use and misuse of correspondence analysis in codon usage studies

1 reference

12 December 2020

The extent of codon usage bias in human RNA viruses and its evolutionary origin

1 reference

12 December 2020

Early detection of antibodies against various structural proteins of the SARS-associated coronavirus in SARS patients

1 reference

12 December 2020

Expression and purification of turkey coronavirus nucleocapsid protein in Escherichia coli

1 reference

12 December 2020

Codon usage between genomes is constrained by genome-wide mutational processes

1 reference

12 December 2020

Analysis of synonymous codon usage in SARS Coronavirus and other viruses in the Nidovirales

1 reference

12 December 2020

Cloning, sequencing, expression, and purification of SARS-associated coronavirus nucleocapsid protein for serodiagnosis of SARS.

1 reference

12 December 2020

The spike protein of severe acute respiratory syndrome (SARS) is cleaved in virus infected Vero-E6 cells

1 reference

12 December 2020

Nucleocapsid protein as early diagnostic marker for SARS.

1 reference

12 December 2020

Reasoning of spike glycoproteins being more vulnerable to mutations among 158 coronavirus proteins from different species.

1 reference

12 December 2020

Monoclonal antibody-based antigen capture enzyme-linked immunosorbent assay reveals high sensitivity of the nucleocapsid protein in acute-phase sera of severe acute respiratory syndrome patients

1 reference

12 December 2020

Characterization of monoclonal antibody against SARS coronavirus nucleocapsid antigen and development of an antigen capture ELISA.

1 reference

12 December 2020

Analysis of synonymous codon usage in H5N1 virus and other influenza A viruses

1 reference

12 December 2020

False-positive results in a recombinant severe acute respiratory syndrome-associated coronavirus (SARS-CoV) nucleocapsid-based western blot assay were rectified by the use of two subunits (S1 and S2) of spike for detection of antibody to SARS-CoV.

1 reference

12 December 2020

Determination and application of immunodominant regions of SARS coronavirus spike and nucleocapsid proteins recognized by sera from different animal species

1 reference

12 December 2020

Convergent host-parasite codon usage between honeybee and bee associated viral genomes

1 reference

12 December 2020

Search for potential target site of nucleocapsid gene for the design of an epitope-based SARS DNA vaccine

1 reference

12 December 2020

Comparison of correspondence analysis methods for synonymous codon usage in bacteria

1 reference

12 December 2020

Detection of antibodies against SARS-Coronavirus using recombinant truncated nucleocapsid proteins by ELISA

1 reference

12 December 2020

Comparative study of synonymous codon usage variations between the nucleocapsid and spike genes of coronavirus, and C-type lectin domain genes of human and mouse

1 reference

12 December 2020

Bioinformatics, enzymologic properties, and comprehensive tracking of Plasmodium falciparum nucleoside diphosphate kinase

1 reference

12 December 2020

The exceptional properties of Plasmodium deoxyguanylate pathways as a potential area for metabolic and drug discovery studies

1 reference

12 December 2020

Thymidylate kinase: the lost chemotherapeutic target

1 reference

12 December 2020

Viral adaptation to host: a proteome-based analysis of codon usage and amino acid preferences

1 reference

12 December 2020

Research and development of universal influenza vaccines

1 reference

12 December 2020

A structural analysis of M protein in coronavirus assembly and morphology

1 reference

12 December 2020

A detailed comparative analysis on the overall codon usage patterns in hepatitis A virus

1 reference

12 December 2020

Development of a recombinant truncated nucleocapsid protein based immunoassay for detection of antibodies against human coronavirus OC43

1 reference

12 December 2020

The coronavirus E protein: assembly and beyond

1 reference

12 December 2020

High codon adaptation in citrus tristeza virus to its citrus host

1 reference

12 December 2020

Codon usage bias: causative factors, quantification methods and genome-wide patterns: with emphasis on insect genomes

1 reference

12 December 2020

Selective pressure dominates the synonymous codon usage in parvoviridae

1 reference

12 December 2020

Immunoreactivity characterisation of the three structural regions of the human coronavirus OC43 nucleocapsid protein by Western blot: implications for the diagnosis of coronavirus infection

1 reference

12 December 2020

Structure of the Fusion Core and Inhibition of Fusion by a Heptad Repeat Peptide Derived from the S Protein of Middle East Respiratory Syndrome Coronavirus

1 reference

12 December 2020

The coronavirus nucleocapsid is a multifunctional protein.

1 reference

12 December 2020

Effects of human anti-spike protein receptor binding domain antibodies on severe acute respiratory syndrome coronavirus neutralization escape and fitness

1 reference

12 December 2020

Characterization of the porcine epidemic diarrhea virus codon usage bias

1 reference

12 December 2020

Genome-wide analysis of codon usage bias in Ebolavirus

1 reference

12 December 2020

Analysing codon usage bias of cyprinid herpesvirus 3 and adaptation of this virus to the hosts

1 reference

12 December 2020

Analysis of synonymous codon usage patterns in duck hepatitis A virus: a comparison on the roles of mutual pressure and natural selection

1 reference

12 December 2020

Roles for Synonymous Codon Usage in Protein Biogenesis

1 reference

12 December 2020

Analysis of codon usage pattern evolution in avian rotaviruses and their preferred host

1 reference

12 December 2020

Evolutionary characterization of Tembusu virus infection through identification of codon usage patterns

1 reference

12 December 2020

Genomic analysis of codon usage shows influence of mutation pressure, natural selection, and host features on Marburg virus evolution

1 reference

12 December 2020

The Code of Silence: Widespread Associations Between Synonymous Codon Biases and Gene Function

1 reference

12 December 2020

Revelation of Influencing Factors in Overall Codon Usage Bias of Equine Influenza Viruses

1 reference

12 December 2020

Analysis of the synonymous codon usage bias in recently emerged enterovirus D68 strains

1 reference

12 December 2020

Codon usage in Alphabaculovirus and Betabaculovirus hosted by the same insect species is weak, selection dominated and exhibits no more similar patterns than expected

1 reference

12 December 2020

Impact of the biased nucleotide composition of viral RNA genomes on RNA structure and codon usage

1 reference

12 December 2020

Synonymous and Biased Codon Usage by MERS CoV Papain-Like and 3CL-Proteases

1 reference

12 December 2020

10.1016/J.JVIROMET.2019.113806

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31911390%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

29 April 2020

COVIDWHO ID

covidwho-7252

0 references

1123832402

1 reference

Dimensions COVID-19 publications, datasets and clinical trials

DOI

10.6084/M9.FIGSHARE.11961063

28 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31911390%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31911390%20AND%20SRC:MED&resulttype=core&format=json