(Q84919764)

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Enriched partial correlations in genome-wide gene expression profiles of hybrids (A. thaliana): a systems biological approach towards the molecular basis of heterosis

scientific article published on 17 November 2009

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scholarly article

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12 February 2020

Enriched partial correlations in genome-wide gene expression profiles of hybrids (A. thaliana): a systems biological approach towards the molecular basis of heterosis (English)

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12 February 2020

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Joachim Selbig

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Sandra Andorf

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Thomas Altmann

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Kathrin Poos

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Hanna Witucka-Wall

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Dirk Repsilber

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17 November 2009

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12 February 2020

Theoretical and Applied Genetics

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120

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249-259

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https://scigraph.springernature.com/pub.10.1007/s00122-009-1214-z

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Heterosis and adaptability in the heat tolerance of mice

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A shrinkage approach to large-scale covariance matrix estimation and implications for functional genomics.

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Genome-wide transcript analysis of maize hybrids: allelic additive gene expression and yield heterosis

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All possible modes of gene action are observed in a global comparison of gene expression in a maize F1 hybrid and its inbred parents

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Network motifs: simple building blocks of complex networks

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MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes

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Global functional profiling of gene expression.

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Towards systems biology of heterosis: a hypothesis about molecular network structure applied for the Arabidopsis metabolome

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The Plant Ontology Consortium and plant ontologies

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Network biology: understanding the cell's functional organization

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Correlation between parental transcriptome and field data for the characterization of heterosis in Zea mays L.

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Crosstalk in plant cell signaling: structure and function of the genetic network

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Analysis of variance for gene expression microarray data

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Normalization of cDNA microarray data

1 reference

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A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize

1 reference

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The role of epistasis in the manifestation of heterosis: a systems-oriented approach.

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1 reference

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An empirical Bayes approach to inferring large-scale gene association networks.

1 reference

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12 December 2020

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Organ-specific expression of Arabidopsis genome during development.

1 reference

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Bioconductor: open software development for computational biology and bioinformatics

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In Search of the Molecular Basis of Heterosis

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Prediction of hybrid biomass in Arabidopsis thaliana by selected parental SNP and metabolic markers

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A unified approach to false discovery rate estimation

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Discovering functional relationships between RNA expression and chemotherapeutic susceptibility using relevance networks

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Experimental design for gene expression microarrays

1 reference

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A comparison of background correction methods for two-colour microarrays

1 reference

https://pubmed.ncbi.nlm.nih.gov/19921139

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Multiplicative vs. arbitrary gene action in heterosis

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https://pubmed.ncbi.nlm.nih.gov/19921139

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Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation

1 reference

https://pubmed.ncbi.nlm.nih.gov/19921139

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Gene expression of a gene family in maize based on noncollinear haplotypes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19921139

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THE MENDELIAN THEORY OF HEREDITY AND THE AUGMENTATION OF VIGOR

1 reference

https://pubmed.ncbi.nlm.nih.gov/19921139

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Comparative evaluation of reverse engineering gene regulatory networks with relevance networks, graphical gaussian models and bayesian networks.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19921139

12 December 2020

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Transcriptome-based distance measures for grouping of germplasm and prediction of hybrid performance in maize

1 reference

https://pubmed.ncbi.nlm.nih.gov/19921139

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GeneTrail--advanced gene set enrichment analysis

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Improved heterosis prediction by combining information on DNA- and metabolic markers

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Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. II. Grain yield components

1 reference

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Transcriptional regulatory networks in Saccharomyces cerevisiae

1 reference

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Genetic analysis of variation in gene expression in Arabidopsis thaliana

1 reference

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Acclimatization to high temperatures in inbred and outbred Drosophila subobscura. J. Genet. 1956, 54, 497-505.

1 reference

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Dominance is the major genetic basis of heterosis in rice as revealed by QTL analysis using molecular markers

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From correlation to causation networks: a simple approximate learning algorithm and its application to high-dimensional plant gene expression data

1 reference

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Heterozygosity, Environmental Variation and Heterosis

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A transcriptomic analysis of superhybrid rice LYP9 and its parents

1 reference

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Heterosis of biomass production in Arabidopsis. Establishment during early development.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19921139

12 December 2020

based on heuristic

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Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. I. Biomass and grain yield

1 reference

https://pubmed.ncbi.nlm.nih.gov/19921139

12 December 2020

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The Arabidopsis Information Resource (TAIR): gene structure and function annotation.

1 reference

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Identifiers

10.1007/S00122-009-1214-Z

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12 February 2020

1 reference

Europe PubMed Central

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12 February 2020

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