(Q85006185)

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Formation of immature and mature genomic RNA dimers in wild-type and protease-inactive HIV-1: Differential roles of the Gag polyprotein, nucleocapsid proteins NCp15, NCp9, NCp7, and the dimerization initiation site

scientific article published on 09 September 2010

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Europe PubMed Central

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13 February 2020

Formation of immature and mature genomic RNA dimers in wild-type and protease-inactive HIV-1: differential roles of the Gag polyprotein, nucleocapsid proteins NCp15, NCp9, NCp7, and the dimerization initiation site (English)

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20828778%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Formation of immature and mature genomic RNA dimers in wild-type and protease-inactive HIV-1: Differential roles of the Gag polyprotein, nucleocapsid proteins NCp15, NCp9, NCp7, and the dimerization initiation site (English)

1 reference

10.1016/J.VIROL.2010.08.013

https://api.crossref.org/works/10.1016/J.VIROL.2010.08.013

9 July 2024

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20828778

9 July 2024

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Mohammad Jalalirad

1

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Europe PubMed Central

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13 February 2020

Michael Laughrea

2

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13 February 2020

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National Center for Biotechnology Information

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=20828778

9 July 2024

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9 September 2010

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13 February 2020

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9 July 2024

https://api.elsevier.com/content/article/PII:S004268221000543X?httpAccept=text/xml

1 reference

10.1016/J.VIROL.2010.08.013

https://api.crossref.org/works/10.1016/J.VIROL.2010.08.013

9 July 2024

https://api.elsevier.com/content/article/PII:S004268221000543X?httpAccept=text/plain

1 reference

10.1016/J.VIROL.2010.08.013

https://api.crossref.org/works/10.1016/J.VIROL.2010.08.013

9 July 2024

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20828778%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

407

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Europe PubMed Central

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13 February 2020

2

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Europe PubMed Central

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13 February 2020

225-236

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20828778%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Role of the zinc fingers of HIV-1 nucleocapsid protein in maturation of genomic RNA.

1 reference

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7 January 2021

Three-dimensional structure of HIV-1 virus-like particles by electron cryotomography.

1 reference

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7 January 2021

The galvanization of biology: a growing appreciation for the roles of zinc

1 reference

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7 January 2021

Zn(2+) binding properties of single-point mutants of the C-terminal zinc finger of the HIV-1 nucleocapsid protein: evidence of a critical role of cysteine 49 in Zn(2+) dissociation

1 reference

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7 January 2021

Analysis of the contribution of reverse transcriptase and integrase proteins to retroviral RNA dimer conformation

1 reference

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7 January 2021

Three-dimensional analysis of budding sites and released virus suggests a revised model for HIV-1 morphogenesis

1 reference

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7 January 2021

The connection domain in reverse transcriptase facilitates the in vivo annealing of tRNALys3 to HIV-1 genomic RNA

1 reference

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7 January 2021

High efficiency of HIV-1 genomic RNA packaging and heterozygote formation revealed by single virion analysis

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Identification of a major restriction in HIV-1 intersubtype recombination

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Molecular determinants of HIV-1 intersubtype recombination potential.

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Long-range recombination gradient between HIV-1 subtypes B and C variants caused by sequence differences in the dimerization initiation signal region.

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Mutational analysis of the C-terminal gag cleavage sites in human immunodeficiency virus type 1

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Nucleic acid binding and chaperone properties of HIV-1 Gag and nucleocapsid proteins

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Cleavage of HIV-1 gag polyprotein synthesized in vitro: sequential cleavage by the viral protease

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Effects of Gag mutation and processing on retroviral dimeric RNA maturation

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Role of capsid precursor processing and myristoylation in morphogenesis and infectivity of human immunodeficiency virus type 1

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

A retroviral Cys-Xaa2-Cys-Xaa4-His-Xaa4-Cys peptide binds metal ions: spectroscopic studies and a proposed three-dimensional structure

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Dynamics of HIV-1 assembly and release

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Imaging the interaction of HIV-1 genomes and Gag during assembly of individual viral particles

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Mapping of nucleocapsid residues important for HIV-1 genomic RNA dimerization and packaging

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Role of capsid sequence and immature nucleocapsid proteins p9 and p15 in Human Immunodeficiency Virus type 1 genomic RNA dimerization

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Kissing-loop model of HIV-1 genome dimerization: HIV-1 RNAs can assume alternative dimeric forms, and all sequences upstream or downstream of hairpin 248-271 are dispensable for dimer formation

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

HIV-1 genome dimerization: formation kinetics and thermal stability of dimeric HIV-1Lai RNAs are not improved by the 1-232 and 296-790 regions flanking the kissing-loop domain

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Role of distal zinc finger of nucleocapsid protein in genomic RNA dimerization of human immunodeficiency virus type 1; no role for the palindrome crowning the R-U5 hairpin

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Human cellular nucleic acid-binding protein Zn2+ fingers support replication of human immunodeficiency virus type 1 when they are substituted in the nucleocapsid protein

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Zinc binding to the HIV-1 nucleocapsid protein: a thermodynamic investigation by fluorescence spectroscopy

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Transmission electron microscopy reveals an optimal HIV-1 nucleocapsid aggregation with single-stranded nucleic acids and the mature HIV-1 nucleocapsid protein

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Nucleocapsid protein-mediated maturation of dimer initiation complex of full-length SL1 stemloop of HIV-1: sequence effects and mechanism of RNA refolding

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

A kissing complex together with a stable dimer is involved in the HIV-1Lai RNA dimerization process in vitro

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

NCp7 activates HIV-1Lai RNA dimerization by converting a transient loop-loop complex into a stable dimer

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

A loop-loop "kissing" complex is the essential part of the dimer linkage of genomic HIV-1 RNA

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Replacement of the P1 amino acid of human immunodeficiency virus type 1 Gag processing sites can inhibit or enhance the rate of cleavage by the viral protease

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

The Annealing of tRNA3Lys to Human Immunodeficiency Virus Type 1 Primer Binding Site Is Critically Dependent on the NCp7 Zinc Fingers Structure

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

A HIV-1 minimal gag protein is superior to nucleocapsid at in vitro annealing and exhibits multimerization-induced inhibition of reverse transcription

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Dissociation of genome dimerization from packaging functions and virion maturation of human immunodeficiency virus type 1.

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Maintenance of the Gag/Gag-Pol ratio is important for human immunodeficiency virus type 1 RNA dimerization and viral infectivity

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

The conformation of the mature dimeric human immunodeficiency virus type 1 RNA genome requires packaging of pol protein.

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Impact of human immunodeficiency virus type 1 RNA dimerization on viral infectivity and of stem-loop B on RNA dimerization and reverse transcription and dissociation of dimerization from packaging

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Role of stem B, loop B, and nucleotides next to the primer binding site and the kissing-loop domain in human immunodeficiency virus type 1 replication and genomic-RNA dimerization

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

HIV-1 viral RNA is selected in the form of monomers that dimerize in a three-step protease-dependent process; the DIS of stem-loop 1 initiates viral RNA dimerization

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Role of the 5' TAR stem--loop and the U5-AUG duplex in dimerization of HIV-1 genomic RNA.

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Structure of the His44 --> Ala single point mutant of the distal finger motif of HIV-1 nucleocapsid protein: a combined NMR, molecular dynamics simulation, and fluorescence study

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Structural requirement for the two-step dimerization of human immunodeficiency virus type 1 genome

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Two basic regions of NCp7 are sufficient for conformational conversion of HIV-1 dimerization initiation site from kissing-loop dimer to extended-duplex dimer

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Immunological and chemical analysis of P6, the carboxyl-terminal fragment of HIV P15.

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

Nucleotide sequence of the AIDS virus, LAV

1 reference

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The gag precursor contains a specific HIV-1 protease cleavage site between the NC (P7) and P1 proteins

1 reference

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7 January 2021

Mutations of RNA and protein sequences involved in human immunodeficiency virus type 1 packaging result in production of noninfectious virus

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

A mutant of human immunodeficiency virus with reduced RNA packaging and abnormal particle morphology

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

based on heuristic

inferred from DOI database lookup

The human immunodeficiency virus type 1 Gag polyprotein has nucleic acid chaperone activity: possible role in dimerization of genomic RNA and placement of tRNA on the primer binding site

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

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based on heuristic

inferred from DOI database lookup

Maturation of dimeric viral RNA of Moloney murine leukemia virus.

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

based on heuristic

inferred from DOI database lookup

The activity of the protease of human immunodeficiency virus type 1 is initiated at the membrane of infected cells before the release of viral proteins and is required for release to occur with maximum efficiency.

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

7 January 2021

based on heuristic

inferred from DOI database lookup

Identification of a sequence required for efficient packaging of human immunodeficiency virus type 1 RNA into virions

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

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based on heuristic

inferred from DOI database lookup

Determinants of the human immunodeficiency virus type 1 p15NC-RNA interaction that affect enhanced cleavage by the viral protease

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2010.08.013

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based on heuristic

inferred from DOI database lookup

Tightly bound zinc in human immunodeficiency virus type 1, human T-cell leukemia virus type I, and other retroviruses

5

1 reference

10.1016/J.VIROL.2010.08.013

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Identifiers

10.1016/J.VIROL.2010.08.013

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20828778%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20828778%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

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