(Q88786417)

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Assessment of configurations and chemistries of bridged nucleic acids-containing oligomers as external guide sequences: a methodology for inhibition of expression of antibiotic resistance genes

scientific article published on 01 March 2016

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scholarly article

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27 March 2020

Assessment of configurations and chemistries of bridged nucleic acids-containing oligomers as external guide sequences: a methodology for inhibition of expression of antibiotic resistance genes (English)

1 reference

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27 March 2020

antibiotic resistance

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Alfonso Soler-Bistué

4

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27 March 2020

author name string

Alexis Jackson

1

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27 March 2020

Saumya Jani

2

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27 March 2020

Carol Davies Sala

3

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27 March 2020

Angeles Zorreguieta

5

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27 March 2020

Marcelo E Tolmasky

6

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27 March 2020

publication date

1 March 2016

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27 March 2020

Biology Methods and Protocols

1 reference

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27 March 2020

1

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27 March 2020

1

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27 March 2020

copyright license

Creative Commons Attribution-NonCommercial 4.0 International

14 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

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describes a project that uses

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC5108630/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

Versatility of aminoglycosides and prospects for their future

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inhibition of aminoglycoside 6'-N-acetyltransferase type Ib-mediated amikacin resistance in Klebsiella pneumoniae by zinc and copper pyrithione

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNase P RNA mediated cleavage: substrate recognition and catalysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Targeted cleavage of mRNA in vitro by RNase P from Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hitting bacteria at the heart of the central dogma: sequence-specific inhibition

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribonuclease E provides substrates for ribonuclease P-dependent processing of a polycistronic mRNA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribonuclease P.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

OLE RNA, an RNA motif that is highly conserved in several extremophilic bacteria, is a substrate for and can be regulated by RNase P RNA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High-yield production of biologically active recombinant protein in shake flask culture by combination of enzyme-based glucose delivery and increased oxygen transfer

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inhibition of aac(6')-Ib-mediated amikacin resistance by nuclease-resistant external guide sequences in bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bacterial RNase P: a new view of an ancient enzyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Basic peptide-morpholino oligomer conjugate that is very effective in killing bacteria by gene-specific and nonspecific modes

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inhibition of AAC(6')-Ib-mediated resistance to amikacin in Acinetobacter baumannii by an antisense peptide-conjugated 2',4'-bridged nucleic acid-NC-DNA hybrid oligomer

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Processing of E. coli tRNA precursors

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

External guide sequences targeting the aac(6')-Ib mRNA induce inhibition of amikacin resistance

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An overview of the clinical application of antisense oligonucleotides for RNA-targeting therapies

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Design of antisense oligonucleotides stabilized by locked nucleic acids

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Peptide-mediated Cell and In Vivo Delivery of Antisense Oligonucleotides and siRNA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Antisense growth inhibition of methicillin-resistant Staphylococcus aureus by locked nucleic acid conjugated with cell-penetrating peptide as a novel FtsZ inhibitor

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Internalization of Locked Nucleic Acids/DNA Hybrid Oligomers into Escherichia coli.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tackling antibiotic resistance: a dose of common antisense?

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

External Guide Sequences for an RNA Enzyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Immunity Determinant of Phage-plasmid P4 is a Short Processed RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Draft Genome of the Multidrug-Resistant Acinetobacter baumannii Strain A155 Clinical Isolate

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A tRNA-like structure is present in 10Sa RNA, a small stable RNA from Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Human RNase P: a tRNA-processing enzyme and transcription factor

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

External guide sequence technology: a path to development of novel antimicrobial therapeutics

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Model substrates for an RNA enzyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Function and assembly of a chromatin-associated RNase P that is required for efficient transcription by RNA polymerase I

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inhibition of Aminoglycoside 6′- N -Acetyltransferase Type Ib-Mediated Amikacin Resistance by Antisense Oligodeoxynucleotides

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Archaeal/eukaryal RNase P: subunits, functions and RNA diversification

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene-specific effects of antisense phosphorodiamidate morpholino oligomer-peptide conjugates on Escherichia coli and Salmonella enterica serovar typhimurium in pure culture and in tissue culture.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mechanisms for negative regulation by iron of the fatA outer membrane protein gene expression in Vibrio anguillarum 775

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

LNA (locked nucleic acid): high-affinity targeting of complementary RNA and DNA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleotide sequence and in vitro processing of a precursor molecule to Escherichia coli 4.5 S RNA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inactivation of expression of several genes in a variety of bacterial species by EGS technology

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inhibition of gene expression by RNase P.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Delivery of therapeutic oligonucleotides with cell penetrating peptides.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mfold web server for nucleic acid folding and hybridization prediction

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A noncoding RNA in Saccharomyces cerevisiae is an RNase P substrate

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Determinants of Escherichia coli RNase P cleavage site selection: a detailed in vitro and in vivo analysis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rise and dissemination of aminoglycoside resistance: the aac(6')-Ib paradigm

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bacterial antisense RNAs: how many are there, and what are they doing?

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA therapeutics: beyond RNA interference and antisense oligonucleotides

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Potent and nontoxic antisense oligonucleotides containing locked nucleic acids

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Overcoming biological barriers to in vivo efficacy of antisense oligonucleotides.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Aminoglycoside modifying enzymes

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNase P from bacteria. Substrate recognition and function of the protein subunit

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transposon-mediated amikacin resistance in Klebsiella pneumoniae

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A role for the catalytic ribonucleoprotein RNase P in RNA polymerase III transcription

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cholesterol-lowering Action of BNA-based Antisense Oligonucleotides Targeting PCSK9 in Atherogenic Diet-induced Hypercholesterolemic Mice

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

2',4'-BNA(NC): a novel bridged nucleic acid analogue with excellent hybridizing and nuclease resistance profiles

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cellular uptake and intracellular trafficking of oligonucleotides

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inhibition of aminoglycoside 6'-N-acetyltransferase type Ib by zinc: reversal of amikacin resistance in Acinetobacter baumannii and Escherichia coli by a zinc ionophore

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A view of RNase P.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The kinetics and specificity of cleavage by RNase P is mainly dependent on the structure of the amino acid acceptor stem

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNase P: variations and uses

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A peptide-morpholino oligomer conjugate targeting Staphylococcus aureus gyrA mRNA improves healing in an infected mouse cutaneous wound model

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A carbapenem-resistant Klebsiella pneumoniae epidemic clone in Jerusalem: sequence type 512 carrying a plasmid encoding aac(6')-Ib.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Precursor of C4 antisense RNA of bacteriophages P1 and P7 is a substrate for RNase P of Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein-RNA interactions in the RNase P holoenzyme from Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bactericidal antisense effects of peptide-PNA conjugates.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Application of locked nucleic acids to improve aptamer in vivo stability and targeting function

1 reference

https://pubmed.ncbi.nlm.nih.gov/27857983

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/BIOMETHODS/BPW001

1 reference

Europe PubMed Central

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27 March 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27857983%20AND%20SRC:MED&resulttype=core&format=json

27 March 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27857983%20AND%20SRC:MED&resulttype=core&format=json

27 March 2020

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