(Q89449672)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

title

Single-Cell Transcriptomics of a Human Kidney Allograft Biopsy Specimen Defines a Diverse Inflammatory Response (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

single cell transcriptomics

5 April 2020

main subject

1 reference

A curated database reveals trends in single-cell transcriptomics

https://www.nxn.se/single-cell-studies/data.tsv

7 February 2021

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Yuhei Kirita

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Benjamin D Humphreys

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

author name string

Andrew F Malone

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Erinn L Donnelly

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Kohei Uchimura

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Sai M Ramakrishnan

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Joseph P Gaut

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

publication date

6 July 2018

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

external data available at URL

5 April 2020

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114156

1 reference

A curated database reveals trends in single-cell transcriptomics

https://www.nxn.se/single-cell-studies/data.tsv

Journal of the American Society of Nephrology

7 February 2021

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

volume

29

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

issue

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

page(s)

2069-2080

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

5 April 2020

kidney

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

https://www.nxn.se/single-cell-studies/data.tsv

cites work

Ligation of HLA class I molecules on smooth muscle cells with anti-HLA antibodies induces tyrosine phosphorylation, fibroblast growth factor receptor expression and cell proliferation

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12 December 2020

Role of Src kinases and Syk in Fcgamma receptor-mediated phagocytosis and phagosome-lysosome fusion.

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CD83 on dendritic cells: more than just a marker for maturation

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12 December 2020

Biopsy-negative cardiac transplant rejection: etiology, diagnosis, and therapy.

1 reference

12 December 2020

RhoA activation mediates phosphatidylinositol 3-kinase-dependent proliferation of human vascular endothelial cells: an alloimmune mechanism of chronic allograft nephropathy

1 reference

12 December 2020

alpha(v)beta(6) Integrin expression in diseased and transplanted kidneys

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12 December 2020

Anti-HLA class I antibodies activate endothelial cells and promote chronic rejection

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12 December 2020

Regulation of Weibel-Palade body exocytosis

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12 December 2020

Angiogenesis and endothelial cell repair in renal disease and allograft rejection

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12 December 2020

Development, migration, and survival of mast cells

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12 December 2020

Antibody to human leukocyte antigen triggers endothelial exocytosis

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12 December 2020

RNA interference elucidates the role of focal adhesion kinase in HLA class I-mediated focal adhesion complex formation and proliferation in human endothelial cells

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12 December 2020

HLA class I antibody-mediated endothelial cell proliferation via the mTOR pathway

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12 December 2020

Monocyte infiltration and kidney allograft dysfunction during acute rejection

1 reference

12 December 2020

Role of mast cells in progressive renal diseases

1 reference

12 December 2020

Neonatal Fc receptor mediates internalization of Fc in transfected human endothelial cells

1 reference

12 December 2020

Molecular correlates of scarring in kidney transplants: the emergence of mast cell transcripts

1 reference

12 December 2020

Dendritic cell differentiation induced by a self-peptide derived from apolipoprotein E.

1 reference

12 December 2020

Identifying specific causes of kidney allograft loss.

1 reference

12 December 2020

Anti-HLA I antibodies induce VEGF production by endothelial cells, which increases proliferation and paracellular permeability

1 reference

12 December 2020

Endothelial gene expression in kidney transplants with alloantibody indicates antibody-mediated damage despite lack of C4d staining.

1 reference

12 December 2020

Antibody-mediated microcirculation injury is the major cause of late kidney transplant failure

1 reference

12 December 2020

Evidence for antibody-mediated injury as a major determinant of late kidney allograft failure

1 reference

12 December 2020

Nomenclature of monocytes and dendritic cells in blood.

1 reference

12 December 2020

Immunoglobulin g (IgG) expression in human umbilical cord endothelial cells

1 reference

12 December 2020

Understanding the causes of kidney transplant failure: the dominant role of antibody-mediated rejection and nonadherence

1 reference

12 December 2020

Macrophages: contributors to allograft dysfunction, repair, or innocent bystanders?

1 reference

12 December 2020

Molecular diagnosis of antibody-mediated rejection in human kidney transplants

1 reference

12 December 2020

Potential impact of microarray diagnosis of T cell-mediated rejection in kidney transplants: The INTERCOM study

1 reference

12 December 2020

A shift towards pro-inflammatory CD16+ monocyte subsets with preserved cytokine production potential after kidney transplantation.

1 reference

12 December 2020

Microarray diagnosis of antibody-mediated rejection in kidney transplant biopsies: an international prospective study (INTERCOM).

1 reference

12 December 2020

Translational profiles of medullary myofibroblasts during kidney fibrosis.

1 reference

12 December 2020

Molecular landscape of T cell-mediated rejection in human kidney transplants: prominence of CTLA4 and PD ligands

1 reference

12 December 2020

Fluorescent in situ sequencing (FISSEQ) of RNA for gene expression profiling in intact cells and tissues.

1 reference

12 December 2020

Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells.

1 reference

12 December 2020

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

1 reference

12 December 2020

Sox9 Activation Highlights a Cellular Pathway of Renal Repair in the Acutely Injured Mammalian Kidney

1 reference

12 December 2020

Gene Expression in Biopsies of Acute Rejection and Interstitial Fibrosis/Tubular Atrophy Reveals Highly Shared Mechanisms That Correlate With Worse Long-Term Outcomes.

1 reference

12 December 2020

Biopsy transcriptome expression profiling to identify kidney transplants at risk of chronic injury: a multicentre, prospective study

1 reference

12 December 2020

Proteomics of Human Dendritic Cell Subsets Reveals Subset-Specific Surface Markers and Differential Inflammasome Function

1 reference

12 December 2020

Analysis of the brain mural cell transcriptome

1 reference

12 December 2020

Massively parallel digital transcriptional profiling of single cells

1 reference

12 December 2020

Early Phase Mast Cell Activation Determines the Chronic Outcome of Renal Ischemia-Reperfusion Injury

1 reference

12 December 2020

Endothelial Cells in Antibody-Mediated Rejection of Kidney Transplantation: Pathogenesis Mechanisms and Therapeutic Implications.

1 reference

12 December 2020

Pretransplant Numbers of CD16+ Monocytes as a Novel Biomarker to Predict Acute Rejection After Kidney Transplantation: A Pilot Study.

1 reference

12 December 2020

SC3: consensus clustering of single-cell RNA-seq data

1 reference

12 December 2020

Cholesterol Accumulation in Dendritic Cells Links the Inflammasome to Acquired Immunity.

1 reference

12 December 2020

The ATP-binding cassette transporter A1 regulates phosphoantigen release and Vγ9Vδ2 T cell activation by dendritic cells.

1 reference

12 December 2020

A comparative strategy for single-nucleus and single-cell transcriptomes confirms accuracy in predicted cell-type expression from nuclear RNA.

1 reference

12 December 2020

Psychrophilic proteases dramatically reduce single-cell RNA-seq artifacts: a molecular atlas of kidney development

1 reference

12 December 2020

The Drosophila embryo at single-cell transcriptome resolution.

1 reference

12 December 2020

Bringing Renal Biopsy Interpretation Into the Molecular Age With Single-Cell RNA Sequencing.

1 reference

12 December 2020

Integrating single-cell transcriptomic data across different conditions, technologies, and species

1 reference

12 December 2020

Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease.

1 reference

12 December 2020

Identifiers

DOI

10.1681/ASN.2018020125

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29980650%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

PubMed publication ID

29980650

1 reference