(Q90259363)

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Genome-Wide Association Mapping for Cold Tolerance in a Core Collection of Rice (Oryza sativa L.) Landraces by Using High-Density Single Nucleotide Polymorphism Markers From Specific-Locus Amplified Fragment Sequencing

scientific article published on 28 June 2018

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scholarly article

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12 April 2020

Genome-Wide Association Mapping for Cold Tolerance in a Core Collection of Rice (Oryza sativa L.) Landraces by Using High-Density Single Nucleotide Polymorphism Markers From Specific-Locus Amplified Fragment Sequencing (English)

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12 April 2020

object named as

Oryza sativa

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inferred from title

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author name string

Jiayu Song

1

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12 April 2020

Jinqun Li

2

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12 April 2020

Jian Sun

3

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12 April 2020

Tao Hu

4

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12 April 2020

Aiting Wu

5

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12 April 2020

Sitong Liu

6

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12 April 2020

Wenjia Wang

7

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12 April 2020

Dianrong Ma

8

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12 April 2020

Minghui Zhao

9

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12 April 2020

publication date

28 June 2018

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12 April 2020

Frontiers in Plant Science

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12 April 2020

9

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12 April 2020

875

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12 April 2020

copyright license

Creative Commons Attribution 4.0 International

28 June 2018

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April 2022 Public Data File from Crossref

copyright status

0 references

AFLP: a new technique for DNA fingerprinting

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A robust method for detecting single-nucleotide changes as polymorphic markers by PCR

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

OsDREB genes in rice, Oryza sativa L., encode transcription activators that function in drought-, high-salt- and cold-responsive gene expression.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mapping of quantitative trait loci controlling low-temperature germinability in rice (Oryza sativa L.).

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Physical mapping and putative candidate gene identification of a quantitative trait locus Ctb1 for cold tolerance at the booting stage of rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mapping quantitative trait loci using naturally occurring genetic variance among commercial inbred lines of maize (Zea mays L.).

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A unified mixed-model method for association mapping that accounts for multiple levels of relatedness

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of stress-responsive CIPK genes in rice for stress tolerance improvement

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A quantitative trait locus for cold tolerance at the booting stage on rice chromosome 8

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

New insights into the history of rice domestication

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetics and phylogenetics of rice domestication

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High-throughput genotyping by whole-genome resequencing.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fast model-based estimation of ancestry in unrelated individuals

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide analysis of genes targeted by qLTG3-1 controlling low-temperature germinability in rice.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification and analysis of QTLs controlling cold tolerance at the reproductive stage and validation of effective QTLs in cold-tolerant genotypes of rice (Oryza sativa L.).

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mixed linear model approach adapted for genome-wide association studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification and fine mapping of a major quantitative trait locus originating from wild rice, controlling cold tolerance at the seedling stage

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Origins of functional nucleotide polymorphisms in a major quantitative trait locus, qLTG3-1, controlling low-temperature germinability in rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Population structure and genetic diversity in a rice core collection (Oryza sativa L.) investigated with SSR markers

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A R2R3-type MYB gene, OsMYB2, is involved in salt, cold, and dehydration tolerance in rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide analysis and expression profiling of the DREB transcription factor gene family in Malus under abiotic stress

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A map of rice genome variation reveals the origin of cultivated rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

SLAF-seq: an efficient method of large-scale de novo SNP discovery and genotyping using high-throughput sequencing

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA-seq analysis of oil palm under cold stress reveals a different C-repeat binding factor (CBF) mediated gene expression pattern in Elaeis guineensis compared to other species

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Knock-down of stress inducible OsSRFP1 encoding an E3 ubiquitin ligase with transcriptional activation activity confers abiotic stress tolerance through enhancing antioxidant protection in rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

COLD1 confers chilling tolerance in rice.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A transposable element in a NAC gene is associated with drought tolerance in maize seedlings

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

TENOR: Database for Comprehensive mRNA-Seq Experiments in Rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic variation in ZmVPP1 contributes to drought tolerance in maize seedlings

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide Association Mapping of Cold Tolerance Genes at the Seedling Stage in Rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Natural variation in CTB4a enhances rice adaptation to cold habitats

1 reference

https://pubmed.ncbi.nlm.nih.gov/30013584

12 December 2020

based on heuristic

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Identifiers

10.3389/FPLS.2018.00875

1 reference

Europe PubMed Central

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12 April 2020

1 reference

Europe PubMed Central

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12 April 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30013584%20AND%20SRC:MED&resulttype=core&format=json

12 April 2020

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