(Q91525471)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

title

Automated optimized parameters for T-distributed stochastic neighbor embedding improve visualization and analysis of large datasets (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

1 reference

t-Distributed Stochastic Neighbor Embedding

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Richard Halpert

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Josef Spidlen

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

author name string

Christopher O Ciccolella

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Rina Anno

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Jennifer E Snyder-Cappione

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

publication date

28 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

published in

Nature Communications

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

volume

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

page(s)

5415

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

23 April 2020

cites work

1 reference

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Cytofkit: A Bioconductor Package for an Integrated Mass Cytometry Data Analysis Pipeline

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Visual analysis of mass cytometry data by hierarchical stochastic neighbour embedding reveals rare cell types.

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7 January 2021

UMAP: Uniform Manifold Approximation and Projection

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7 January 2021

FlowSOM: Using self-organizing maps for visualization and interpretation of cytometry data

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7 January 2021

Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis

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7 January 2021

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7 January 2021

Detection of minimal residual disease in B lymphoblastic leukemia using viSNE.

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7 January 2021

Identification and visualization of multidimensional antigen-specific T-cell populations in polychromatic cytometry data.

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7 January 2021

Low-dose IL-2 selectively activates subsets of CD4+ Tregs and NK cells

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7 January 2021

Hierarchical Stochastic Neighbor Embedding

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7 January 2021

Fast interpolation-based t-SNE for improved visualization of single-cell RNA-seq data

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7 January 2021

How to Use t-SNE Effectively

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7 January 2021

Comparison of clustering methods for high-dimensional single-cell flow and mass cytometry data.

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7 January 2021

The art of using t-SNE for single-cell transcriptomics

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7 January 2021

OMIP-037: 16-color panel to measure inhibitory receptor signatures from multiple human immune cell subsets

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7 January 2021

SCANPY: large-scale single-cell gene expression data analysis.

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7 January 2021

CD28 negative T cells: is their loss our gain?

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7 January 2021

Integrating single-cell transcriptomic data across different conditions, technologies, and species

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7 January 2021

Mass Cytometry of Follicular Lymphoma Tumors Reveals Intrinsic Heterogeneity in Proteins Including HLA-DR and a Deficit in Nonmalignant Plasmablast and Germinal Center B-Cell Populations

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7 January 2021

Background fluorescence and spreading error are major contributors of variability in high-dimensional flow cytometry data visualization by t-distributed stochastic neighboring embedding

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7 January 2021

OMIP-042: 21-color flow cytometry to comprehensively immunophenotype major lymphocyte and myeloid subsets in human peripheral blood.

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7 January 2021

OMIP-044: 28-color immunophenotyping of the human dendritic cell compartment.

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7 January 2021

OMIP-050: A 28-color/30-parameter Fluorescence Flow Cytometry Panel to Enumerate and Characterize Cells Expressing a Wide Array of Immune Checkpoint Molecules

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7 January 2021

Simultaneous epitope and transcriptome measurement in single cells

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7 January 2021

Approximated and User Steerable tSNE for Progressive Visual Analytics.

1 reference

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7 January 2021

Generalizable and Scalable Visualization of Single-Cell Data Using Neural Networks

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7 January 2021

Cytometry: today's technology and tomorrow's horizons

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7 January 2021

Automatic Classification of Cellular Expression by Nonlinear Stochastic Embedding (ACCENSE).

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7 January 2021

Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum

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7 January 2021

Multivariate Computational Analysis of Gamma Delta T Cell Inhibitory Receptor Signatures Reveals the Divergence of Healthy and ART-Suppressed HIV+ Aging

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7 January 2021

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Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31780669%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

1 reference