(Q91666009)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

title

Gut uropathogen abundance is a risk factor for development of bacteriuria and urinary tract infection (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

main subject

urinary tract infection

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Jennifer Huang

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Iwijn De Vlaminck

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

18

Eric Pamer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

author name string

Matthew Magruder

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Catherine Gong

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Lisa Zhang

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Emmanuel Edusei

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Shady Albakry

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Michael J Satlin

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Lars F Westblade

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Carl Crawford

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Darshana M Dadhania

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Michelle Lubetzky

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Ying Taur

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Eric Littman

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Lilan Ling

15

1 reference

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23 April 2020

Philip Burnham

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

Manikkam Suthanthiran

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

John Richard Lee

20

1 reference

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23 April 2020

publication date

4 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

published in

Nature Communications

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

volume

10

1 reference

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23 April 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

page(s)

5521

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

Species-level functional profiling of metagenomes and metatranscriptomes

23 April 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Community profiling of the urinary microbiota: considerations for low-biomass samples

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Reconstitution of the gut microbiota of antibiotic-treated patients by autologous fecal microbiota transplant

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Intestinal microbiome as a risk factor for urinary tract infections in children

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Urinary cell-free DNA is a versatile analyte for monitoring infections of the urinary tract.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Gut microbiota dysbiosis and diarrhea in kidney transplant recipients

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Impact of gut colonization with butyrate producing microbiota on respiratory viral infection following allo-HCT.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Optimization of fecal sample processing for microbiome study - The journey from bathroom to bench.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

The challenge of urinary tract infections in renal transplant recipients.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Fecal Microbiota Transplantation for Recurrent Clostridium difficile Infection Reduces Recurrent Urinary Tract Infection Frequency

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

UroPathogenic Escherichia coli (UPEC) Infections: Virulence Factors, Bladder Responses, Antibiotic, and Non-antibiotic Antimicrobial Strategies

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Association between virulence profile, biofilm formation and phylogenetic groups of Escherichia coli causing urinary tract infection and the commensal gut microbiota: A comparative analysis.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Microbial strain-level population structure and genetic diversity from metagenomes

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

MEGARes: an antimicrobial resistance database for high throughput sequencing.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Single-stranded DNA library preparation uncovers the origin and diversity of ultrashort cell-free DNA in plasma

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Pretreatment gut microbiome predicts chemotherapy-related bloodstream infection

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

MetaPhlAn2 for enhanced metagenomic taxonomic profiling

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Loss of Vancomycin-Resistant Enterococcus Fecal Dominance in an Organ Transplant Patient With Clostridium difficile Colitis After Fecal Microbiota Transplant.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Error filtering, pair assembly and error correction for next-generation sequencing reads

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Evaluation of Infectious Complications in the First Year After Kidney Transplantation

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Urinary tract infections: epidemiology, mechanisms of infection and treatment options

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Gut microbial community structure and complications after kidney transplantation: a pilot study

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Impact of urinary tract infection on allograft function after kidney transplantation

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Urinary tract infection syndromes: occurrence, recurrence, bacteriology, risk factors, and disease burden

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

RefSeq microbial genomes database: new representation and annotation strategy

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

UPARSE: highly accurate OTU sequences from microbial amplicon reads

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Independent risk factors for urinary tract infection and for subsequent bacteremia or acute cellular rejection: a single-center report of 1166 kidney allograft recipients

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Intestinal domination and the risk of bacteremia in patients undergoing allogeneic hematopoietic stem cell transplantation

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Structure, function and diversity of the healthy human microbiome

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Fast gapped-read alignment with Bowtie 2

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Systematic screening and treatment of asymptomatic bacteriuria in renal transplant recipients

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Late urinary tract infection after renal transplantation in the United States

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

MUSCLE: multiple sequence alignment with high accuracy and high throughput

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Urinary tract infections: disease panorama and challenges

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

EMBOSS: the European Molecular Biology Open Software Suite

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

Basic local alignment search tool

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6893017

10.1038/S41467-019-13467-W

23 February 2021

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31797927%20AND%20SRC:MED&resulttype=core&format=json

23 April 2020

PubMed publication ID

31797927

1 reference