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An Interactive Resource to Probe Genetic Diversity and Estimated Ancestry in Cancer Cell Lines
scientific article published on 20 March 2019
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scholarly article
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Europe PubMed Central
PMC publication ID
6445675
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 April 2020
title
An Interactive Resource to Probe Genetic Diversity and Estimated Ancestry in Cancer Cell Lines
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
6445675
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 April 2020
main subject
genetic diversity
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inferred from title
author
Alvaro Monteiro
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
6445675
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 April 2020
Jamie K Teer
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4
1 reference
stated in
Europe PubMed Central
PMC publication ID
6445675
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
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30 April 2020
author name string
Julie Dutil
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1
1 reference
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Europe PubMed Central
PMC publication ID
6445675
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 April 2020
Zhihua Chen
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2
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Europe PubMed Central
PMC publication ID
6445675
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 April 2020
Steven A Eschrich
series ordinal
5
1 reference
stated in
Europe PubMed Central
PMC publication ID
6445675
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
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30 April 2020
publication date
20 March 2019
1 reference
stated in
Europe PubMed Central
PMC publication ID
6445675
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 April 2020
published in
Cancer Research
1 reference
stated in
Europe PubMed Central
PMC publication ID
6445675
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 April 2020
volume
79
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Europe PubMed Central
PMC publication ID
6445675
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 April 2020
issue
7
1 reference
stated in
Europe PubMed Central
PMC publication ID
6445675
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 April 2020
page(s)
1263-1273
1 reference
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Europe PubMed Central
PMC publication ID
6445675
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 April 2020
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Type-specific cell line models for type-specific ovarian cancer research
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11 February 2021
Global proteome analysis of the NCI-60 cell line panel
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11 February 2021
Evaluating cell lines as tumour models by comparison of genomic profiles
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11 February 2021
Bioethics in popular science: evaluating the media impact of The Immortal Life of Henrietta Lacks on the biobank debate
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11 February 2021
The clinical relevance of cancer cell lines.
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11 February 2021
Prevalence and type of BRCA mutations in Hispanics undergoing genetic cancer risk assessment in the southwestern United States: a report from the Clinical Cancer Genetics Community Research Network
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11 February 2021
Genomics of Drug Sensitivity in Cancer (GDSC): a resource for therapeutic biomarker discovery in cancer cells
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11 February 2021
The combined effect of individual and neighborhood socioeconomic status on cancer survival rates
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11 February 2021
Expression of aldehyde dehydrogenase 1 as a marker of mammary stem cells in benign and malignant breast lesions of Ghanaian women
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PubMed Central
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11 February 2021
Concordance of gene expression and functional correlation patterns across the NCI-60 cell lines and the Cancer Genome Atlas glioblastoma samples
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11 February 2021
Breast cancer characteristics and outcomes among Hispanic Black and Hispanic White women
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11 February 2021
Metabolite profiling identifies a key role for glycine in rapid cancer cell proliferation
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11 February 2021
The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity
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11 February 2021
Evaluation of 19 susceptibility loci of breast cancer in women of African ancestry
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11 February 2021
JFCR39, a panel of 39 human cancer cell lines, and its application in the discovery and development of anticancer drugs
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11 February 2021
Differential confounding of rare and common variants in spatially structured populations
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11 February 2021
BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
American Society of Clinical Oncology policy statement: opportunities in the patient protection and affordable care act to reduce cancer care disparities
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11 February 2021
Replication of breast cancer GWAS susceptibility loci in the Women's Health Initiative African American SHARe Study
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11 February 2021
Genomics for the world
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11 February 2021
Genome-wide association study of prostate cancer in men of African ancestry identifies a susceptibility locus at 17q21.
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11 February 2021
The justification of race in biological explanation
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11 February 2021
Genetic heterogeneity of self-reported ancestry groups in an admixed Brazilian population.
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11 February 2021
Interactions among genes, tumor biology and the environment in cancer health disparities: examining the evidence on a national and global scale
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11 February 2021
Triple-negative breast cancer in Hispanic patients: high prevalence, poor prognosis, and association with menopausal status, body mass index, and parity.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Advances in the preclinical testing of cancer therapeutic hypotheses.
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11 February 2021
Replication and functional genomic analyses of the breast cancer susceptibility locus at 6q25.1 generalize its importance in women of chinese, Japanese, and European ancestry
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Disparities in breast cancer characteristics and outcomes by race/ethnicity
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Triple-Negative Breast Cancer
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Lung Cancer Cell Lines as Tools for Biomedical Discovery and Research
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Ancestry-shift refinement mapping of the C6orf97-ESR1 breast cancer susceptibility locus
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Cell line misidentification: the beginning of the end
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Analysis of Food and Drug Administration-approved anticancer agents in the NCI60 panel of human tumor cell lines
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Molecular target class is predictive of in vitro response profile
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Exploring genetic susceptibility to cancer in diverse populations
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Cell line-based platforms to evaluate the therapeutic efficacy of candidate anticancer agents
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
How accurate are cancer cell lines?
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Check your cultures! A list of cross-contaminated or misidentified cell lines
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Integrative analysis of proteomic signatures, mutations, and drug responsiveness in the NCI 60 cancer cell line set
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Lung cancer cell lines: Useless artifacts or invaluable tools for medical science?
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Expression of aldehyde dehydrogenase 1 (ALDH1) is associated with basal-like markers and features of aggressive tumours in African breast cancer
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
COSMIC (the Catalogue of Somatic Mutations in Cancer): a resource to investigate acquired mutations in human cancer
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Evaluation of 11 breast cancer susceptibility loci in African-American women
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Fast model-based estimation of ancestry in unrelated individuals
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
CellMiner: a relational database and query tool for the NCI-60 cancer cell lines
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Predicting drug susceptibility of non-small cell lung cancers based on genetic lesions
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
A primary xenograft model of small-cell lung cancer reveals irreversible changes in gene expression imposed by culture in vitro
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Genome-wide association study identifies a new breast cancer susceptibility locus at 6q25.1.
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11 February 2021
Social determinants of Black-White disparities in breast cancer mortality: a review
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Genetic admixture, self-reported ethnicity, self-estimated admixture, and skin pigmentation among Hispanics and Native Americans
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Comparing genetic ancestry and self-described race in african americans born in the United States and in Africa
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
High-throughput lung cancer cell line screening for genotype-correlated sensitivity to an EGFR kinase inhibitor
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Maps of random walks on complex networks reveal community structure
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Integrating global gene expression and radiation survival parameters across the 60 cell lines of the National Cancer Institute Anticancer Drug Screen
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Identification of genotype-correlated sensitivity to selective kinase inhibitors by using high-throughput tumor cell line profiling
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Breast cancer among Hispanic and non-Hispanic White women in Arizona.
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11 February 2021
Race, genetics and medicine: does the color of a leopard's spots matter?
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
The relationship between "race" and genetics in biomedical research.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
A collection of breast cancer cell lines for the study of functionally distinct cancer subtypes
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
The NCI60 human tumour cell line anticancer drug screen
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Self-reported race and genetic admixture
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Anthropological insights into the use of race/ethnicity to explore genetic contributions to disparities in health.
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11 February 2021
Population structure, differential bias and genomic control in a large-scale, case-control association study
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Prediction of radiation sensitivity using a gene expression classifier
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Identification of differentially expressed genes contributing to radioresistance in lung cancer cells using microarray analysis
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Examining population stratification via individual ancestry estimates versus self-reported race
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Timeline: Chemotherapy and the war on cancer.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Genetic structure, self-identified race/ethnicity, and confounding in case-control association studies
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Changing the paradigm from 'race' to human genome variation
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
What we do and don't know about 'race', 'ethnicity', genetics and health at the dawn of the genome era
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Environmental and chemical carcinogenesis
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
The effects of human population structure on large genetic association studies
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Transcriptomic analysis of the NCI-60 cancer cell lines
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
The importance of race and ethnic background in biomedical research and clinical practice
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Categorization of humans in biomedical research: genes, race and disease
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Race, ethnicity, and genomics: social classifications as proxies of biological heterogeneity
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Race, ethnicity, and health: can genetics explain disparities?
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Racial and ethnic disparities in the receipt of cancer treatment
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Chemosensitivity prediction by transcriptional profiling
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
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11 February 2021
Effector genes altered in MCF-7 human breast cancer cells after exposure to fractionated ionizing radiation
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
retrieved
11 February 2021
Mining the National Cancer Institute Anticancer Drug Discovery Database: cluster analysis of ellipticine analogs with p53-inverse and central nervous system-selective patterns of activity.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
retrieved
11 February 2021
Human cells and cell cultures: availability, authentication and future prospects
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
retrieved
11 February 2021
An information-intensive approach to the molecular pharmacology of cancer.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
retrieved
11 February 2021
Display and analysis of patterns of differential activity of drugs against human tumor cell lines: development of mean graph and COMPARE algorithm.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
retrieved
11 February 2021
Feasibility of a high-flux anticancer drug screen using a diverse panel of cultured human tumor cell lines
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6445675
retrieved
11 February 2021
Identifiers
DOI
10.1158/0008-5472.CAN-18-2747
1 reference
stated in
Europe PubMed Central
PMC publication ID
6445675
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 April 2020
PMC publication ID
6445675
1 reference
stated in
Europe PubMed Central
PMC publication ID
6445675
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 April 2020
PubMed publication ID
30894373
1 reference
stated in
Europe PubMed Central
PMC publication ID
6445675
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30894373%20AND%20SRC:MED&resulttype=core&format=json
retrieved
30 April 2020
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