(Q100539872)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33053177%20AND%20SRC:MED&resulttype=core&format=json

18 October 2020

title

Stump removal and tree species composition promote a bacterial microbiome that may be beneficial in the suppression of root disease (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33053177%20AND%20SRC:MED&resulttype=core&format=json

18 October 2020

2

Suzanne Simard

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33053177%20AND%20SRC:MED&resulttype=core&format=json

18 October 2020

1

Dixi Modi

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33053177%20AND%20SRC:MED&resulttype=core&format=json

18 October 2020

author name string

Les Lavkulich

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33053177%20AND%20SRC:MED&resulttype=core&format=json

18 October 2020

Richard C Hamelin

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33053177%20AND%20SRC:MED&resulttype=core&format=json

18 October 2020

Sue J Grayston

series ordinal

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33053177%20AND%20SRC:MED&resulttype=core&format=json

18 October 2020

publication date

14 October 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33053177%20AND%20SRC:MED&resulttype=core&format=json

FEMS Microbiology Ecology

18 October 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33053177%20AND%20SRC:MED&resulttype=core&format=json

Ectomycorrhizal fungal succession in mixed temperate forests

18 October 2020

cites work

2 references

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28 January 2022

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Long-term effects of stump removal and tree species composition on the diversity and structure of soil fungal communities

28 January 2022

2 references

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28 January 2022

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Soil Bacterial and Fungal Communities Show Distinct Recovery Patterns during Forest Ecosystem Restoration

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Speak, friend, and enter: signalling systems that promote beneficial symbiotic associations in plants

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Digging deeper to find unique microbial communities: The strong effect of depth on the structure of bacterial and archaeal communities in soil

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data

28 January 2022

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Belowground Microbiota and the Health of Tree Crops.

28 January 2022

1 reference

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Rapid Transfer of Plant Photosynthates to Soil Bacteria via Ectomycorrhizal Hyphae and Its Interaction With Nitrogen Availability

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Responses of soil carbon and nitrogen transformations to stump removal

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

ggplot2: Elegant Graphics for Data Analysis

28 January 2022

1 reference

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Effects of wildfire and harvest disturbances on forest soil bacterial communities

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

The under-recognized dominance of Verrucomicrobia in soil bacterial communities

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Bacterial diversity associated with subalpine fir (Abies lasiocarpa) ectomycorrhizae following wildfire and salvage-logging in central British Columbia.

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Environmental and anthropogenic controls over bacterial communities in wetland soils

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Functional assays and metagenomic analyses reveals differences between the microbial communities inhabiting the soil horizons of a Norway spruce plantation

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Predicting the temperature dependence of microbial respiration in soil: A continental-scale analysis

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Fluorescent pseudomonad population sizes baited from soils under pure birch, pure Douglas-fir, and mixed forest stands and their antagonism towardArmillaria ostoyaein vitro

28 January 2022

2 references

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28 January 2022

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Metacoder: An R package for visualization and manipulation of community taxonomic diversity data

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Modulation of the Root Microbiome by Plant Molecules: The Basis for Targeted Disease Suppression and Plant Growth Promotion

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Bacteria associated with decomposing dead wood in a natural temperate forest

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Detection and quantification of a mycorrhization helper bacterium and a mycorrhizal fungus in plant-soil microcosms at different levels of complexity

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Toward an ecological classification of soil bacteria.

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly.

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Illumina MiSeq investigations on the changes of microbial community in the Fusarium oxysporum f.sp. cubense infected soil during and after reductive soil disinfestation.

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Plant growth-promoting rhizobacteria (PGPR): Their potential as antagonists and biocontrol agents

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Seasonal dynamics of fungal communities in a temperate oak forest soil.

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

The Earth Microbiome project: successes and aspirations

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Isolation and characterization of novel bacterial strains exhibiting ligninolytic potential

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Plant host and soil origin influence fungal and bacterial assemblages in the roots of woody plants

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Bacterial, archaeal and eukaryal community structures throughout soil horizons of harvested and naturally disturbed forest stands

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Application of targeted metagenomics to explore abundance and diversity of CO₂-fixing bacterial community using cbbL gene from the rhizosphere of Arachis hypogaea.

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples.

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Forest health and global change

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Pyrosequencing-based assessment of bacterial community structure along different management types in German forest and grassland soils

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Aerobic Anoxygenic Phototrophic Bacteria Promote the Development of Biological Soil Crusts

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Biological control of soil-borne pathogens by fluorescent pseudomonads

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Changes in assembly processes in soil bacterial communities following a wildfire disturbance

28 January 2022

1 reference

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Forest microbiome: diversity, complexity and dynamics.

28 January 2022

1 reference

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Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

The role of root exudates in rhizosphere interactions with plants and other organisms

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Rhodoplanes piscinae sp. nov. isolated from pond water

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Forest Soil Bacteria: Diversity, Involvement in Ecosystem Processes, and Response to Global Change

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

FastTree 2--approximately maximum-likelihood trees for large alignments

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Nitrogen-fixing legume tree species for the reclamation of severely degraded lands in Brazil

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Complete nitrification by Nitrospira bacteria

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Compaction of forest soil by logging machinery favours occurrence of prokaryotes.

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Characterization and identification of productivity-associated rhizobacteria in wheat

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

VSEARCH: a versatile open source tool for metagenomics

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Metagenomic biomarker discovery and explanation

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Phylogenetic diversity of non-nodulating Rhizobium associated with pine ectomycorrhizae

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

DADA2: High-resolution sample inference from Illumina amplicon data

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

mvabund- anRpackage for model-based analysis of multivariate abundance data

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

The Ecology of Acidobacteria: Moving beyond Genes and Genomes

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Tree Species Shape Soil Bacterial Community Structure and Function in Temperate Deciduous Forests

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Soil biodiversity and DNA barcodes: opportunities and challenges

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Influence of soil characteristics on the diversity of bacteria in the Southern Brazilian Atlantic Forest.

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

Molecular analysis of bacterial communities associated with the roots of Douglas fir (Pseudotsuga menziesii) colonized by different ectomycorrhizal fungi.

28 January 2022

1 reference

https://opencitations.net/index/coci/api/v1/references/10.1093/FEMSEC/FIAA213

28 January 2022

Identifiers

DOI

10.1093/FEMSEC/FIAA213

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33053177%20AND%20SRC:MED&resulttype=core&format=json

18 October 2020

1 reference