(Q108899740)

1

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Luke S. Ferro

2

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Michael J. Trnka

3

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Eddie Wehri

4

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Amrut Nadgir

5

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Xammy Nguyenla

6

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Douglas Fox

7

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Katelyn Costa

8

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Sarah Stanley

9

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Julia Schaletzky

10

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Ahmet Yildiz

Creative Commons Attribution 4.0 International

11

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language of work or name

English

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publication date

11 October 2021

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published in

PLOS Biology

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volume

19

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issue

10

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page(s)

e3001425

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copyright license

start time

11 October 2021

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Considerations and Challenges in Studying Liquid-Liquid Phase Separation and Biomolecular Condensates

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

Lysine/RNA-interactions drive and regulate biomolecular condensation

15 October 2021

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Nucleocapsid Protein Recruitment to Replication-Transcription Complexes Plays a Crucial Role in Coronaviral Life Cycle

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

Chemical cross-linking in the structural analysis of protein assemblies

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

SARS-CoV-2 (COVID-19) by the numbers

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

Liquid-liquid phase separation by SARS-CoV-2 nucleocapsid protein and RNA

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

Molecular Architecture of the SARS-CoV-2 Virus

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

Competing Protein-RNA Interaction Networks Control Multiphase Intracellular Organization

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

Composition-dependent thermodynamics of intracellular phase separation

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

A molecular pore spans the double membrane of the coronavirus replication organelle

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

A SARS-CoV-2 protein interaction map reveals targets for drug repurposing

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

SARS-CoV-2 nucleocapsid protein undergoes liquid-liquid phase separation into stress granules through its N-terminal intrinsically disordered region

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

The SARS-CoV-2 nucleocapsid phosphoprotein forms mutually exclusive condensates with RNA and the membrane-associated M protein

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

Energetic and structural features of SARS-CoV-2 N-protein co-assemblies with nucleic acids

15 October 2021

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Targeting liquid–liquid phase separation of SARS-CoV-2 nucleocapsid protein promotes innate antiviral immunity by elevating MAVS activity

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

15 October 2021

ViennaRNA Package 2.0

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HIV protease inhibitor nelfinavir inhibits replication of SARS-associated coronavirus

15 October 2021

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Liquid-liquid phase separation in biology

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

Nucleocapsid phosphorylation and RNA helicase DDX1 recruitment enables coronavirus transition from discontinuous to continuous transcription

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

The coronavirus nucleocapsid is a multifunctional protein.

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

Reentrant Phase Transition Drives Dynamic Substructure Formation in Ribonucleoprotein Droplets.

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

Analysis of multimerization of the SARS coronavirus nucleocapsid protein

15 October 2021

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A Membraneless Organelle Associated with the Endoplasmic Reticulum Enables 3′UTR-Mediated Protein-Protein Interactions

15 October 2021

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Phosphoregulation of Phase Separation by the SARS-CoV-2 N Protein Suggests a Biophysical Basis for its Dual Functions

15 October 2021

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Genomic RNA Elements Drive Phase Separation of the SARS-CoV-2 Nucleocapsid

15 October 2021

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Engineering human ACE2 to optimize binding to the spike protein of SARS coronavirus 2

15 October 2021

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An ER translocon for multi-pass membrane protein biogenesis

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

Structural basis of RNA recognition by the SARS-CoV-2 nucleocapsid phosphoprotein

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

Matching cross-linked peptide spectra: only as good as the worse identification

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

The M, E, and N structural proteins of the severe acute respiratory syndrome coronavirus are required for efficient assembly, trafficking, and release of virus-like particles

15 October 2021

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Structure of the SARS coronavirus nucleocapsid protein RNA-binding dimerization domain suggests a mechanism for helical packaging of viral RNA

15 October 2021

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Glycogen synthase kinase-3 regulates the phosphorylation of severe acute respiratory syndrome coronavirus nucleocapsid protein and viral replication

15 October 2021

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RNA phase transitions in repeat expansion disorders

15 October 2021

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15 October 2021

The Vienna RNA websuite

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Opposing effects of toll-like receptor (TLR3) signaling in tumors can be therapeutically uncoupled to optimize the anticancer efficacy of TLR3 ligands

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Negri bodies are viral factories with properties of liquid organelles

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

The tip of the iceberg: RNA-binding proteins with prion-like domains in neurodegenerative disease.

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

RNA self-assembly contributes to stress granule formation and defining the stress granule transcriptome

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Repurposing of clinically developed drugs for treatment of Middle East respiratory syndrome coronavirus infection

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Phase separation drives heterochromatin domain formation

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

A User's Guide for Phase Separation Assays with Purified Proteins

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Transient oligomerization of the SARS-CoV N protein--implication for virus ribonucleoprotein packaging.

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

G-quadruplex formation in telomeres enhances POT1/TPP1 protection against RPA binding

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Liquid droplet formation by HP1α suggests a role for phase separation in heterochromatin.

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Analyses of Coronavirus Assembly Interactions with Interspecies Membrane and Nucleocapsid Protein Chimeras

15 October 2021

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https://api.crossref.org/works/10.1371/journal.pbio.3001425

Protein Dynamics in Solution by Quantitative Crosslinking/Mass Spectrometry

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

A major determinant for membrane protein interaction localizes to the carboxy-terminal domain of the mouse coronavirus nucleocapsid protein

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Viral genome structures are optimal for capsid assembly

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Multiple nucleic acid binding sites and intrinsic disorder of severe acute respiratory syndrome coronavirus nucleocapsid protein: implications for ribonucleocapsid protein packaging.

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

A Liquid-to-Solid Phase Transition of the ALS Protein FUS Accelerated by Disease Mutation.

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Biomolecular condensates: organizers of cellular biochemistry

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Phosphorylation of the arginine/serine dipeptide-rich motif of the severe acute respiratory syndrome coronavirus nucleocapsid protein modulates its multimerization, translation inhibitory activity and cellular localization

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

mRNA structure determines specificity of a polyQ-driven phase separation.

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Phase Transitions Drive the Formation of Vesicular Stomatitis Virus Replication Compartments

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Rapid reconstruction of SARS-CoV-2 using a synthetic genomics platform

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

A unifying structural and functional model of the coronavirus replication organelle: Tracking down RNA synthesis

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Spontaneous driving forces give rise to protein-RNA condensates with coexisting phases and complex material properties

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Phase 1/2 study of COVID-19 RNA vaccine BNT162b1 in adults

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Liquid-liquid phase separation of tau protein: The crucial role of electrostatic interactions

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

SARS-CoV-2 nucleocapsid protein phase-separates with RNA and with human hnRNPs

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

On the Calculation of TCID50 for Quantitation of Virus Infectivity

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Architecture and self-assembly of the SARS-CoV-2 nucleocapsid protein

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Structural basis of receptor recognition by SARS-CoV-2

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Measles virus nucleo- and phosphoproteins form liquid-like phase-separated compartments that promote nucleocapsid assembly

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Remdesivir Inhibits SARS-CoV-2 in Human Lung Cells and Chimeric SARS-CoV Expressing the SARS-CoV-2 RNA Polymerase in Mice

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

COVID-19 vaccine BNT162b1 elicits human antibody and TH1 T-cell responses

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Crystal structure of SARS-CoV-2 nucleocapsid protein RNA binding domain reveals potential unique drug targeting sites

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Identification of potential molecules against COVID-19 main protease through structure-guided virtual screening approach

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

The Coronavirus Nucleocapsid Protein

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

The Global Phosphorylation Landscape of SARS-CoV-2 Infection

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Salt-Dependent Rheology and Surface Tension of Protein Condensates Using Optical Traps

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Pan-retroviral Nucleocapsid-Mediated Phase Separation Regulates Genomic RNA Positioning and Trafficking

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425

Molecular determinants for regulation of G3BP1/2 phase separation by the SARS-CoV-2 nucleocapsid protein

15 October 2021

1 reference

https://api.crossref.org/works/10.1371/journal.pbio.3001425