(Q21133677)

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CRISPR-Cas systems in the cyanobacterium Synechocystis sp. PCC6803 exhibit distinct processing pathways involving at least two Cas6 and a Cmr2 protein

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CRISPR-Cas systems in the cyanobacterium Synechocystis sp. PCC6803 exhibit distinct processing pathways involving at least two Cas6 and a Cmr2 protein (English)

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1 reference

based on heuristic

inferred from title

5

object named as

Rolf Backofen

author given names

Rolf

author last names

Backofen

1 reference

16 August 2022

Wolfgang René Hess

object named as

Wolfgang R Hess

4

author given names

Wolfgang R

author last names

Hess

1 reference

16 August 2022

author name string

Ingeborg Scholz

1

author given names

Ingeborg

author last names

Scholz

1 reference

16 August 2022

Sita J Lange

2

author given names

Sita J

author last names

Lange

1 reference

16 August 2022

Stephanie Hein

3

author given names

Stephanie

author last names

Hein

1 reference

16 August 2022

language of work or name

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publication date

2013

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8

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2

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e56470

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copyright license

Creative Commons Attribution 4.0 International

18 February 2013

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April 2022 Public Data File from Crossref

copyright status

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CRISPR-based adaptive immune systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

19 March 2017

CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

19 March 2017

The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants

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19 March 2017

Fast mapping of short sequences with mismatches, insertions and deletions using index structures

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

19 March 2017

Evolutionary conservation of sequence and secondary structures in CRISPR repeats

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

19 March 2017

A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

19 March 2017

A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

19 March 2017

Csy4 relies on an unusual catalytic dyad to position and cleave CRISPR RNA

1 reference

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19 March 2017

Structure of the Cmr2 Subunit of the CRISPR-Cas RNA Silencing Complex

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

19 March 2017

Structure and Mechanism of the CMR Complex for CRISPR-Mediated Antiviral Immunity

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

19 March 2017

Recognition and maturation of effector RNAs in a CRISPR interference pathway

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19 March 2017

An RNA-induced conformational change required for CRISPR RNA cleavage by the endoribonuclease Cse3

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19 March 2017

Structural and Functional Characterization of an Archaeal Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR)-associated Complex for Antiviral Defense (CASCADE)

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19 March 2017

Interaction of the Cas6 Riboendonuclease with CRISPR RNAs: Recognition and Cleavage

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

19 March 2017

Sequence- and Structure-Specific RNA Processing by a CRISPR Endonuclease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

19 March 2017

Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

19 March 2017

Small CRISPR RNAs guide antiviral defense in prokaryotes

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

19 March 2017

Global or local? Predicting secondary structure and accessibility in mRNAs

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

19 March 2017

Integrative genomics viewer

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

7 April 2017

RNA-guided genetic silencing systems in bacteria and archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

7 April 2017

Evolution and classification of the CRISPR-Cas systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

7 April 2017

CRISPR interference: RNA-directed adaptive immunity in bacteria and archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

7 April 2017

CRISPR/Cas, the immune system of bacteria and archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

7 April 2017

RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

7 April 2017

CRISPR--a widespread system that provides acquired resistance against phages in bacteria and archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

7 April 2017

A genome-wide view of the expression and processing patterns of Thermus thermophilus HB8 CRISPR RNAs

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

Essential features and rational design of CRISPR RNAs that function with the Cas RAMP module complex to cleave RNAs.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

CRISPR loci reveal networks of gene exchange in archaea

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

Nature and intensity of selection pressure on CRISPR-associated genes

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

Mature clustered, regularly interspaced, short palindromic repeats RNA (crRNA) length is measured by a ruler mechanism anchored at the precursor processing site

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

Defense islands in bacterial and archaeal genomes and prediction of novel defense systems

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

Structural basis for CRISPR RNA-guided DNA recognition by Cascade

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

Clustered regularly interspaced short palindromic repeats (CRISPRs): the hallmark of an ingenious antiviral defense mechanism in prokaryotes

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

CRISPR-based immune systems of the Sulfolobales: complexity and diversity

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

An experimentally anchored map of transcriptional start sites in the model cyanobacterium Synechocystis sp. PCC6803.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

Dynamic properties of the Sulfolobus CRISPR/Cas and CRISPR/Cmr systems when challenged with vector-borne viral and plasmid genes and protospacers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

Binding and cleavage of CRISPR RNA by Cas6

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

Presence of a classical RRM-fold palm domain in Thg1-type 3'- 5'nucleic acid polymerases and the origin of the GGDEF and CRISPR polymerase domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

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12 September 2017

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12 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

CRISPR-based adaptive and heritable immunity in prokaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

Prokaryotic silencing (psi)RNAs in Pyrococcus furiosus

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

Structural analysis of four large plasmids harboring in a unicellular cyanobacterium, Synechocystis sp. PCC 6803.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

GGDEF domain is homologous to adenylyl cyclase

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

12 September 2017

Adaptation and modification of three CRISPR loci in two closely related cyanobacteria

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

30 May 2018

Microevolution in cyanobacteria: re-sequencing a motile substrain of Synechocystis sp. PCC 6803.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575380

30 May 2018

The repetitive DNA elements called CRISPRs and their associated genes: evidence of horizontal transfer among prokaryotes.

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0056470

21 January 2018

CRISPR/Cas and Cmr modules, mobility and evolution of adaptive immune systems.

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0056470

21 January 2018

Recognition of archaeal CRISPR RNA: No P in the alindromic repeat?

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0056470

21 January 2018

CRISPR transcript processing: a mechanism for generating a large number of small interfering RNAs

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0056470

21 January 2018

Fast folding and comparison of RNA secondary structures

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0056470

21 January 2018

Local RNA base pairing probabilities in large sequences.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0056470

21 January 2018

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1 reference

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29 November 2018

Identifiers

10.1371/JOURNAL.PONE.0056470

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2013PLoSO...856470S

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OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

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