(Q21135368)

English

Evolution and taxonomic classification of human papillomavirus 16 (HPV16)-related variant genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67

scientific article

Evolution and Taxonomic Classification of Human Papillomavirus 16 (HPV16)-Related Variant Genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67

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scholarly article

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Evolution and taxonomic classification of human papillomavirus 16 (HPV16)-related variant genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67 (English)

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human papillomavirus 16

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based on heuristic

inferred from title

object named as

Zigui Chen

1

author given names

Zigui

author last names

Chen

1 reference

PubMed publication ID

16 August 2022

2

object named as

Mark Schiffman

author given names

Mark

author last names

Schiffman

1 reference

PubMed publication ID

16 August 2022

Kathryn M. Anastos

5

object named as

Kathryn Anastos

author given names

Kathryn

author last names

Anastos

1 reference

PubMed publication ID

16 August 2022

10

object named as

Robert D Burk

author given names

Robert D

author last names

Burk

1 reference

PubMed publication ID

16 August 2022

8

author given names

Patti E

author last names

Gravitt

object named as

Patti E Gravitt

1 reference

PubMed publication ID

16 August 2022

author name string

Rolando Herrero

3

author given names

Rolando

author last names

Herrero

1 reference

PubMed publication ID

16 August 2022

Rob Desalle

4

author given names

Rob

author last names

Desalle

1 reference

PubMed publication ID

16 August 2022

Michel Segondy

6

author given names

Michel

author last names

Segondy

1 reference

PubMed publication ID

16 August 2022

Vikrant V Sahasrabuddhe

7

author given names

Vikrant V

author last names

Sahasrabuddhe

1 reference

PubMed publication ID

16 August 2022

Ann W Hsing

9

author given names

Ann W

author last names

Hsing

1 reference

PubMed publication ID

16 August 2022

language of work or name

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publication date

2011

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6

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5

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e20183

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copyright license

Creative Commons CC0 License

27 May 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

A map of human genome variation from population-scale sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

Worldwide genomic diversity of the high-risk human papillomavirus types 31, 35, 52, and 58, four close relatives of human papillomavirus type 16.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

Lack of canonical E6 and E7 open reading frames in bird papillomaviruses: Fringilla coelebs papillomavirus and Psittacus erithacus timneh papillomavirus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

The genetic drift of human papillomavirus type 16 is a means of reconstructing prehistoric viral spread and the movement of ancient human populations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

Global cancer statistics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

Estimates of worldwide burden of cancer in 2008: GLOBOCAN 2008

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

The International HapMap Project

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

MrBayes 3: Bayesian phylogenetic inference under mixed models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

MRBAYES: Bayesian inference of phylogenetic trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

MODELTEST: testing the model of DNA substitution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

PAML: a program package for phylogenetic analysis by maximum likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

Ancient papillomavirus-host co-speciation in Felidae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

Evolution of human papillomavirus type 18: an ancient phylogenetic root in Africa and intratype diversity reflect coevolution with human ethnic groups

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

19 March 2017

SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

7 April 2017

Classification of papillomaviruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

7 April 2017

Epidemiologic classification of human papillomavirus types associated with cervical cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

7 April 2017

Epidemiological and clinical consequences of within-host evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Parallelization of the MAFFT multiple sequence alignment program

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

A population-based prospective study of carcinogenic human papillomavirus variant lineages, viral persistence, and cervical neoplasia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Human papillomavirus infection and cervical cytology in HIV-infected and HIV-uninfected Rwandan women

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Evolutionary dynamics of variant genomes of human papillomavirus types 18, 45, and 97.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Genomic characterization of two novel reptilian papillomaviruses, Chelonia mydas papillomavirus 1 and Caretta caretta papillomavirus 1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

A novel virus detected in papillomas and carcinomas of the endangered western barred bandicoot (Perameles bougainville) exhibits genomic features of both the Papillomaviridae and Polyomaviridae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Prevalence and distribution of HPV genotypes among HIV-infected women in Zambia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Human papillomavirus genotype distribution and cervical squamous intraepithelial lesions among high-risk women with and without HIV-1 infection in Burkina Faso

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Phylogenetic incongruence among oncogenic genital alpha human papillomaviruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Diversifying selection in human papillomavirus type 16 lineages based on complete genome analyses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Papillomavirus subtypes are natural and old taxa: phylogeny of human papillomavirus types 44 and 55 and 68a and -b.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Human papillomavirus type 16 sequence variants: identification by E6 and L1 lineage-specific hybridization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Intratype variation in 12 human papillomavirus types: a worldwide perspective

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Genetic heterogeneity of oncogenic human papillomavirus type 5 (HPV5) and phylogeny of HPV5 variants associated with epidermodysplasia verruciformis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Variation of human papillomavirus type 6 (HPV-6) and HPV-11 genomes sampled throughout the world

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

12 September 2017

Human papillomavirus type distribution in invasive cervical cancer and high-grade cervical lesions: a meta-analysis update.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

27 September 2017

Human papillomavirus type 16 and 18 variants: race-related distribution and persistence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

30 May 2018

Characterization of a novel genital human papillomavirus by overlapping PCR: candHPV86 identified in cervicovaginal cells of a woman with cervical neoplasia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

30 May 2018

Phylogenetic analysis of the human papillomavirus type 2 (HPV-2), HPV-27, and HPV-57 group, which is associated with common warts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

30 May 2018

Nucleotide sequence of human papillomavirus type 31: a cervical neoplasia-associated virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

30 May 2018

Genetic heterogeneity among human papillomaviruses (HPV) associated with epidermodysplasia verruciformis: evidence for multiple allelic forms of HPV5 and HPV8 E6 genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103539

30 May 2018

Human papillomavirus type distribution in 30,848 invasive cervical cancers worldwide: Variation by geographical region, histological type and year of publication

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

The carcinogenicity of human papillomavirus types reflects viral evolution.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

Human papillomavirus type 18 variant lineages in United States populations characterized by sequence analysis of LCR-E6, E2, and L1 regions.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

Prevaccination genomic diversity of human papillomavirus genotype 11: a study on 63 clinical isolates and 10 full-length genome sequences

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

Worldwide genomic diversity of the human papillomaviruses-53, 56, and 66, a group of high-risk HPVs unrelated to HPV-16 and HPV-18.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

Genomic diversity of human papillomavirus-16, 18, 31, and 35 isolates in a Mexican population and relationship to European, African, and Native American variants

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

Polymorphism of the L1 Capsid Gene and Persistence of Human Papillomavirus Type 52 Infection in Women at High Risk or Infected by HIV

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

Polymorphism of human papillomavirus type 31 isolates infecting the genital tract of HIV-seropositive and HIV-seronegative women at risk for HIV infection

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

Genetic variability and phylogeny of the high-risk HPV-31, -33, -35, -52, and -58 in central Brazil

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

High grade cervical lesions are caused preferentially by non-European variants of HPVs 16 and 18.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

Human papillomavirus type 33 polymorphisms and high-grade squamous intraepithelial lesions of the uterine cervix.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

Association of human papillomavirus type 58 variant with the risk of cervical cancer

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

Detection of human papillomavirus from self-collected vaginal samples of women in Chiang Mai, Thailand.

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

The association of hormonal contraceptive use and HPV prevalence.

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

Profile of physical status and gene variation of human papillomavirus 58 genome in cervical cancer.

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

Viral Polymorphism in Human Papillomavirus Types 33 and 35 and Persistent and Transient Infection in the Genital Tract of Women

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0020183

21 January 2018

Human papillomavirus and cervical neoplasia: a case-control study in Taiwan

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https://pubmed.ncbi.nlm.nih.gov/21673791

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Human papillomavirus type 16 variants and risk of cervical cancer

1 reference

https://pubmed.ncbi.nlm.nih.gov/21673791

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Epidemiologic profile of type-specific human papillomavirus infection and cervical neoplasia in Guanacaste, Costa Rica

1 reference

https://pubmed.ncbi.nlm.nih.gov/21673791

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0020183

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2011PLoSO...620183C

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OpenCitations bibliographic resource ID

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PubMed publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

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