(Q33788778)

29 July 2017

title

Diversifying selection in human papillomavirus type 16 lineages based on complete genome analyses (English)

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29 July 2017

0 references

whole genome sequencing

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6

Robert D Burk

1 reference

29 July 2017

Zigui Chen

1

1 reference

29 July 2017

Masanori Terai

2

1 reference

29 July 2017

Leiping Fu

3

1 reference

29 July 2017

Rolando Herrero

4

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29 July 2017

Rob DeSalle

5

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29 July 2017

publication date

1 June 2005

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29 July 2017

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29 July 2017

volume

79

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29 July 2017

issue

11

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29 July 2017

page(s)

7014-7023

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Classification of papillomaviruses

29 July 2017

cites work

1 reference

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4 July 2018

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Comparison of HPV type distribution in high-grade cervical lesions and cervical cancer: a meta-analysis

4 July 2018

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Quantitative role of the human papillomavirus type 16 E5 gene during the productive stage of the viral life cycle

4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

1 reference

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4 July 2018

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4 July 2018

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4 July 2018

1 reference

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Sequence variations and viral genomic state of human papillomavirus type 16 in penile carcinomas from Ugandan patients

4 July 2018

1 reference

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4 July 2018

1 reference

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Human papillomavirus type 16 sequence variation in cervical cancers: a worldwide perspective

4 July 2018

1 reference

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E5 proteins of human papillomavirus types 11 and 16 transactivate the c-fos promoter through the NF1 binding element

4 July 2018

1 reference

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4 July 2018

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The genetic drift of human papillomavirus type 16 is a means of reconstructing prehistoric viral spread and the movement of ancient human populations

4 July 2018

1 reference

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4 July 2018

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The E5 oncoprotein of human papillomavirus type 16 inhibits the acidification of endosomes in human keratinocytes

4 July 2018

1 reference

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4 July 2018

1 reference

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4 July 2018

1 reference

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E6-AP directs the HPV E6-dependent inactivation of p53 and is representative of a family of structurally and functionally related proteins.

4 July 2018

1 reference

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Immune response to human papillomavirus type 16 E6 gene in a live vaccinia vector.

4 July 2018

1 reference

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Human papillomavirus type 16 variant lineages in United States populations characterized by nucleotide sequence analysis of the E6, L2, and L1 coding segments

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Nucleotide sequence of human papillomavirus type 31: a cervical neoplasia-associated virus

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

High-fidelity amplification using a thermostable DNA polymerase isolated from Pyrococcus furiosus

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Mapping of linear epitopes of human papillomavirus type 16: The E1, E2, E4, E5, E6 and E7 open reading frames

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Sequence variants of human papillomavirus type 16 in clinical samples permit verification and extension of epidemiological studies and construction of a phylogenetic tree

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

A cellular protein mediates association of p53 with the E6 oncoprotein of human papillomavirus types 16 or 18

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Nucleotide and amino acid sequence variation in the L1 and E7 open reading frames of human papillomavirus type 6 and type 16

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Molecular variants of human papillomavirus type 16 from four continents suggest ancient pandemic spread of the virus and its coevolution with humankind

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Association between human papillomavirus 16 E6 variants and human leukocyte antigen class I polymorphism in cervical cancer of Swedish women

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Human papillomavirus type-16 variants in Quechua aboriginals from Argentina.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Evidence of diversifying selection in human papillomavirus type 16 E6 but not E7 oncogenes

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Accuracy and power of bayes prediction of amino acid sites under positive selection

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Codon-substitution models to detect adaptive evolution that account for heterogeneous selective pressures among site classes

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Analysis of human papillomavirus type 16 E6 variants in relation to p53 codon 72 polymorphism genotypes in cervical carcinogenesis

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Asian-american variants of human papillomavirus type 16 have extensive mutations in the E2 gene and are highly amplified in cervical carcinomas

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Models of amino acid substitution and applications to mitochondrial protein evolution.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Role of a p53 polymorphism in the development of human papillomavirus-associated cancer

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Natural history of cervicovaginal papillomavirus infection in young women.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Sexual behavior and partner characteristics are the predominant risk factors for genital human papillomavirus infection in young women

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Molecular variants of human papillomavirus types 16 and 18 preferentially associated with cervical neoplasia

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1112126

Asian-American variants of human papillomavirus 16 and risk for cervical cancer: a case-control study

30 October 2018

1 reference

12 December 2020

Human papillomavirus 16 E6 polymorphisms in cervical lesions from different European populations and their correlation with human leukocyte antigen class II haplotypes

1 reference

12 December 2020

Human papillomavirus type 16 E6 variants in cervical carcinoma: relationship to host genetic factors and clinical parameters

1 reference

12 December 2020

Population-based study of human papillomavirus infection and cervical neoplasia in rural Costa Rica

1 reference

12 December 2020

Sequence variants of human papillomavirus type 16 from couples suggest sexual transmission with low infectivity and polyclonality in genital neoplasia

1 reference

12 December 2020

Transcriptional control and cell type specificity of HPV gene expression

1 reference

12 December 2020

Is p53 polymorphism maintained by natural selection?

1 reference

12 December 2020

Identification of a naturally processed HLA A0201-restricted viral peptide from cells expressing human papillomavirus type 16 E6 oncoprotein

1 reference

12 December 2020

The association of an HPV16 oncogene variant with HLA-B7 has implications for vaccine design in cervical cancer

1 reference

12 December 2020

The regulation mechanism of c-jun and junB by human papillomavirus type 16 E5 oncoprotein

1 reference

12 December 2020

Human papillomavirus genotype as a predictor of persistence and development of high-grade lesions in women with minor cervical abnormalities

1 reference

12 December 2020

Human papillomavirus variants: implications for natural history studies and vaccine development efforts

1 reference

12 December 2020

Genomic variation of human papillomavirus type 16 and risk for high grade cervical intraepithelial neoplasia

1 reference

12 December 2020

Risk of cervical cancer and geographical variations of human papillomavirus 16 E6 polymorphisms

1 reference

12 December 2020

Sequence variants and functional analysis of human papillomavirus type 16 E5 gene in clinical specimens

1 reference

12 December 2020

Human papillomavirus type 16 variants and risk of cervical cancer

1 reference

12 December 2020

10.1128/JVI.79.11.7014-7023.2005

Identifiers

DOI

1 reference

29 July 2017

1 reference

29 July 2017

1 reference