(Q21267190)

19 August 2022

7

1 reference

ORCID Public Data File 2021

6

Susan Lucas

Susan

Lucas

1 reference

19 August 2022

12

Loren Hauser

Loren

Hauser

1 reference

19 August 2022

13

Tanja Woyke

Tanja

Woyke

1 reference

19 August 2022

19

Roxanne Tapia

Roxanne

Tapia

1 reference

19 August 2022

4

Francesco Pini

Francesco

Pini

1 reference

19 August 2022

1

Marco Galardini

Marco

Galardini

1 reference

19 August 2022

3

Matteo Brilli

Matteo

Brilli

1 reference

19 August 2022

22

Stefano Mocali

Stefano

Mocali

1 reference

19 August 2022

2

Alessio Mengoni

Alessio

Mengoni

1 reference

19 August 2022

15

Natalia Ivanova

Natalia

Ivanova

1 reference

19 August 2022

Jan-Fang Cheng

8

Jan-Fang

Cheng

1 reference

19 August 2022

17

David Bruce

David

Bruce

1 reference

19 August 2022

20

Cliff Han

Cliff

Han

1 reference

19 August 2022

9

Lynne Goodwin

Lynne

Goodwin

1 reference

19 August 2022

14

Natalia Mikhailova

Natalia

Mikhailova

1 reference

19 August 2022

23

Marco

Bazzicalupo

Marco Bazzicalupo

1 reference

19 August 2022

16

Hajnalka

Daligault

Hajnalka Daligault

1 reference

19 August 2022

21

Hazuki

Teshima

Hazuki Teshima

1 reference

19 August 2022

10

Samuel

Pitluck

Samuel Pitluck

1 reference

19 August 2022

24

Emanuele G

Biondi

Emanuele G Biondi

1 reference

19 August 2022

5

Antonella

Fioravanti

Antonella Fioravanti

1 reference

19 August 2022

18

Chris

Detter

Chris Detter

1 reference

1048799256

full work available at URL

19 August 2022

language of work or name

English

0 references

publication date

2011

0 references

https://doi.org/10.1186/1471-2164-12-235

content deliverer

BioMed Central

copyright license

Creative Commons Attribution 2.0 Generic

0 references

published in

BMC Genomics

0 references

volume

12

0 references

issue

1

0 references

page(s)

235

0 references

cites work

The diversity and evolution of cell cycle regulation in alpha-proteobacteria: a comparative genomic analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

BLAST+: architecture and applications

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Genome sequence of the beta-rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

MEME: discovering and analyzing DNA and protein sequence motifs

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Pathogenomic Sequence Analysis of Bacillus cereus and Bacillus thuringiensis Isolates Closely Related to Bacillus anthracis

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Large-scale genetic variation of the symbiosis-required megaplasmid pSymA revealed by comparative genomic analysis of Sinorhizobium meliloti natural strains

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Genome sequencing in microfabricated high-density picolitre reactors

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

The COG database: an updated version includes eukaryotes

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Artemis: sequence visualization and annotation

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Consed: a graphical tool for sequence finishing

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Base-calling of automated sequencer traces using phred. II. Error probabilities

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Genetic organization of the region encoding regulation, biosynthesis, and transport of rhizobactin 1021, a siderophore produced by Sinorhizobium meliloti

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Genotype-phenotype mapping and the end of the 'genes as blueprint' metaphor

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Identification of direct transcriptional target genes of ExoS/ChvI two-component signaling in Sinorhizobium meliloti

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

FixJ-regulated genes evolved through promoter duplication in Sinorhizobium meliloti.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Prodigal: prokaryotic gene recognition and translation initiation site identification

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

InterProScan--an integration platform for the signature-recognition methods in InterPro

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Automatic clustering of orthologs and in-paralogs from pairwise species comparisons

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Genomic fluidity: an integrative view of gene diversity within microbial populations

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Early Career Research Award Lecture. Structure, evolution and dynamics of transcriptional regulatory networks

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Comparative genomics of VirR regulons in Clostridium perfringens strains

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

The roles of extracellular proteins, polysaccharides and signals in the interactions of rhizobia with legume roots

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Rhizobium leguminosarum hupE encodes a nickel transporter required for hydrogenase activity

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Darwinian evolution in the light of genomics

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

An orphan LuxR homolog of Sinorhizobium meliloti affects stress adaptation and competition for nodulation

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Comparative genomics: the bacterial pan-genome

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Molecular determinants of a symbiotic chronic infection.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Microbiology in the post-genomic era.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Coordinating nodule morphogenesis with rhizobial infection in legumes.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Identification of protein secretion systems and novel secreted proteins in Rhizobium leguminosarum bv. viciae.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Genomes of the symbiotic nitrogen-fixing bacteria of legumes.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

FixJ: a major regulator of the oxygen limitation response and late symbiotic functions of Sinorhizobium meliloti

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

12 September 2017

The microbial pan-genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Transcriptome-based identification of the Sinorhizobium meliloti NodD1 regulon.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Strategies used by rhizobia to lower plant ethylene levels and increase nodulation

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Biosynthesis of phosphatidylcholine in bacteria.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Microevolutionary genomics of bacteria

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

A two-component regulator mediates population-density-dependent expression of the Bradyrhizobium japonicum nodulation genes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

The composite genome of the legume symbiont Sinorhizobium meliloti

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Genetic diversity and dynamics of Sinorhizobium meliloti populations nodulating different alfalfa cultivars in Italian soils

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Finding families for genomic ORFans

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

NodZ of Bradyrhizobium extends the nodulation host range of Rhizobium by adding a fucosyl residue to nodulation signals

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

The "missing" typical Rhizobium leguminosarum O antigen is attached to a fatty acylated glycerol in R. leguminosarum bv. trifolii 4S, a strain that also lacks the usual tetrasaccharide "core" component

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

An insertional point mutation inactivates NolR repressor in Rhizobium meliloti 1021.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Assignment of symbiotic developmental phenotypes to common and specific nodulation (nod) genetic loci of Rhizobium meliloti

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Rhizobium--plant signal exchange

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Comparative genomics of the genus Bifidobacterium

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

The Sinorhizobium meliloti fur gene regulates, with dependence on Mn(II), transcription of the sitABCD operon, encoding a metal-type transporter

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

A Sinorhizobium meliloti lipopolysaccharide mutant altered in cell surface sulfation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Genome variation in the symbiotic nitrogen-fixing bacterium Sinorhizobium meliloti.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Metabolic capacity of Sinorhizobium (Ensifer) meliloti strains as determined by phenotype MicroArray analysis.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Sequence analysis of the 144-kilobase accessory plasmid pSmeSM11a, isolated from a dominant Sinorhizobium meliloti strain identified during a long-term field release experiment

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Analysis of a symbiosis-specific cytochrome P450 homolog in Rhizobium sp. BR816.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

Rhizobium meliloti genes involved in sulfate activation: the two copies of nodPQ and a new locus, saa.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

R Factor Transfer in Rhizobium leguminosarum

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164228

NodMutDB: a database for genes and mutants involved in symbiosis.

30 May 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-12-235

Global changes in gene expression in Sinorhizobium meliloti 1021 under microoxic and symbiotic conditions

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-12-235

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-235

Automatic clustering of orthologs and inparalogs shared by multiple proteomes

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-12-235

Mutational analysis of the Sinorhizobium meliloti short-chain dehydrogenase/reductase family reveals substantial contribution to symbiosis and catabolic diversity

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21569405

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The Rhizobial hemA Gene Is Required for Symbiosis in Species with Deficient [delta]-Aminolevulinic Acid Uptake Activity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21569405

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-12-235

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-235

1 reference

9 September 2019

1 reference

1 reference

PubMed publication ID

21569405

1 reference