(Q22065692)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15853876%20AND%20SRC:MED&resulttype=core&format=json

11 January 2020

review article

1 reference

title

The role of nucleoid-associated proteins in the organization and compaction of bacterial chromatin (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15853876%20AND%20SRC:MED&resulttype=core&format=json

11 January 2020

1

Remus T Dame

Remus T

Dame

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15853876%20AND%20SRC:MED&resulttype=core&format=json

11 January 2020

language of work or name

English

0 references

publication date

1 May 2005

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15853876%20AND%20SRC:MED&resulttype=core&format=json

11 January 2020

published in

Molecular Microbiology

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15853876%20AND%20SRC:MED&resulttype=core&format=json

11 January 2020

volume

56

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15853876%20AND%20SRC:MED&resulttype=core&format=json

11 January 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15853876%20AND%20SRC:MED&resulttype=core&format=json

11 January 2020

page(s)

858-870

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15853876%20AND%20SRC:MED&resulttype=core&format=json

Visualizing protein-nucleic acid interactions on a large scale with the scanning force microscope

11 January 2020

cites work

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

Electron microscopic studies on the folded chromosome of Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

Surveying a supercoil domain by using the gamma delta resolution system in Salmonella typhimurium

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

Lethal overproduction of the Escherichia coli nucleoid protein H-NS: ultramicroscopic and molecular autopsy

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

Multiple site-specific binding of Fis protein to Escherichia coli nuoA-N promoter DNA and its impact on DNA topology visualised by means of scanning force microscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Comparison of protein binding to DNA in vivo and in vitro: defining an effective intracellular target.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Molecular dynamics simulations of small DNA plasmids: effects of sequence and supercoiling on intramolecular motions

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Direct atomic force microscopy visualization of integration host factor-induced DNA bending structure of the promoter regulatory region on the Pseudomonas TOL plasmid

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Variable structures of Fis-DNA complexes determined by flanking DNA-protein contacts

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Differential binding of the Escherichia coli HU, homodimeric forms and heterodimeric form to linear, gapped and cruciform DNA

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

An Lrp-type transcriptional regulator from Agrobacterium tumefaciens condenses more than 100 nucleotides of DNA into globular nucleoprotein complexes

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

The bacterial DNA-binding protein H-NS represses ribosomal RNA transcription by trapping RNA polymerase in the initiation complex

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Specific and non-specific interactions of integration host factor with DNA: thermodynamic evidence for disruption of multiple IHF surface salt-bridges coupled to DNA binding.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Isolation and characterization of spermidine nucleoids from Escherichia coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Polymer-mediated compaction and internal dynamics of isolated Escherichia coli nucleoids.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Electron microscopy of membrane-free folded chromosomes from Escherichia coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Macromolecular crowding and the mandatory condensation of DNA in bacteria

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

On the structure of the folded chromosome of Escherichia coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Interaction of the Escherichia coli HU protein with DNA. Evidence for formation of nucleosome-like structures with altered DNA helical pitch

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Crystal structure of the factor for inversion stimulation FIS at 2.0 A resolution.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

The compaction of DNA helices into either continuous supercoils or folded-fiber rods and toroids

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

E. coli DNA binding protein HU forms nucleosome-like structure with circular double-stranded DNA

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Structure and properties of the bacterial nucleoid

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Curved helix segments can uniquely orient the topology of supertwisted DNA.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

A physiological role for DNA supercoiling in the osmotic regulation of gene expression in S. typhimurium and E. coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

The interaction of E. coli IHF protein with its specific binding sites.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Characterization of the binding of HU and IHF, homologous histone-like proteins of Escherichia coli, to curved and uncurved DNA

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

About the organisation of condensed and decondensed non-eukaryotic DNA and the concept of vegetative DNA (a critical review).

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Crystal structure of the N-terminal dimerisation domain of VicH, the H-NS-like protein of Vibrio cholerae

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Modulation of DNA conformations through the formation of alternative high-order HU-DNA complexes

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Structure of the histone-like protein H-NS and its role in regulation and genome superstructure

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

IHF and HU: flexible architects of bent DNA.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

On the role of H-NS in the organization of bacterial chromatin: from bulk to single molecules and back

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Increased bending rigidity of single DNA molecules by H-NS, a temperature and osmolarity sensor

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

HU: promoting or counteracting DNA compaction?

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

H-NS oligomerization domain structure reveals the mechanism for high order self-association of the intact protein

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Single-molecule studies of DNA architectural changes induced by regulatory proteins

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

SMC proteins in bacteria: condensation motors for chromosome segregation?

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Genome organisation and chromatin structure in Escherichia coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Osmotic compaction of supercoiled DNA into a bacterial nucleoid

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Recent advances in FRET: distance determination in protein-DNA complexes

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Single-molecule fluorescence methods for the study of nucleic acids

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Stretching DNA and RNA to probe their interactions with proteins.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Domain organization and oligomerization among H-NS-like nucleoid-associated proteins in bacteria.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Control of rRNA expression in Escherichia coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

HU binding to bent DNA: a fluorescence resonance energy transfer and anisotropy study

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Micromechanical analysis of the binding of DNA-bending proteins HMGB1, NHP6A, and HU reveals their ability to form highly stable DNA-protein complexes

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

3-A resolution structure of a protein with histone-like properties in prokaryotes.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Three-dimensional structure of the E. coli DNA-binding protein FIS.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

H-NS: a universal regulator for a dynamic genome

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

The H-NS dimerization domain defines a new fold contributing to DNA recognition

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Modulation of the nucleoid, the transcription apparatus, and the translation machinery in bacteria for stationary phase survival

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Effects of the Escherichia coli DNA-binding protein H-NS on rRNA synthesis in vivo.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Suppression of FNR-dependent transcription activation at the Escherichia coli nir promoter by Fis, IHF and H-NS: modulation of transcription initiation by a complex nucleo-protein assembly.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Large-scale monitoring of pleiotropic regulation of gene expression by the prokaryotic nucleoid-associated protein, H-NS.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Involvement of FIS in the H-NS-mediated regulation of virF gene of Shigella and enteroinvasive Escherichia coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

A molecular mechanism for the repression of transcription by the H-NS protein

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

The role of co-transcriptional translation and protein translocation (transertion) in bacterial chromosome segregation

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Complex regulation of csgD promoter activity by global regulatory proteins.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

The distribution of RNA polymerase in Escherichia coli is dynamic and sensitive to environmental cues.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

The virF promoter in Shigella: more than just a curved DNA stretch

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Transcription-induced barriers to supercoil diffusion in the Salmonella typhimurium chromosome

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Dual architectural roles of HU: formation of flexible hinges and rigid filaments

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Compaction of single DNA molecules induced by binding of integration host factor (IHF).

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Supercoiling and denaturation in Gal repressor/heat unstable nucleoid protein (HU)-mediated DNA looping

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Visualization of prokaryotic DNA in a regularly condensed chromatin-like fiber

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Chromosomes in living Escherichia coli cells are segregated into domains of supercoiling

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

The molecular structure of wild-type and a mutant Fis protein: relationship between mutational changes and recombinational enhancer function or DNA binding

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

HU protein of Escherichia coli binds specifically to DNA that contains single-strand breaks or gaps

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Structural basis for H-NS-mediated trapping of RNA polymerase in the open initiation complex at the rrnB P1.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Global gene expression profiling in Escherichia coli K12. The effects of integration host factor

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

The bacterial histone-like protein HU specifically recognizes similar structures in all nucleic acids. DNA, RNA, and their hybrids

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Contribution of DNA conformation and topology in right-handed DNA wrapping by the Bacillus subtilis LrpC protein

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

The binding motif recognized by HU on both nicked and cruciform DNA.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

The histone-like protein HU binds specifically to DNA recombination and repair intermediates

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Regulated phase transitions of bacterial chromatin: a non-enzymatic pathway for generic DNA protection

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Flexible DNA bending in HU-DNA cocrystal structures

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

H1a, an E. coli DNA-binding protein which accumulates in stationary phase, strongly compacts DNA in vitro

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Empirical estimation of protein-induced DNA bending angles: applications to lambda site-specific recombination complexes

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Preferential binding of E.coli histone-like protein HU alpha to negatively supercoiled DNA

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Information analysis of Fis binding sites

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Global structure similarities of intact and nicked DNA complexed with IHF measured in solution by fluorescence resonance energy transfer

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

H-NS mediated compaction of DNA visualised by atomic force microscopy

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Bacillus subtilis LrpC is a sequence-independent DNA-binding and DNA-bending protein which bridges DNA.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

An architectural role of the Escherichia coli chromatin protein FIS in organising DNA.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Histone-like proteins in the purified Escherichia coli deoxyribonucleoprotein

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Properties of DNA-binding of HU heterotypic and homotypic dimers from Escherichia coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

A global role for Fis in the transcriptional control of metabolism and type III secretion in Salmonella enterica serovar Typhimurium.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Topological domain structure of the Escherichia coli chromosome

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

A novel DNA-binding protein with regulatory and protective roles in starved Escherichia coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

The HU-DNA binding interaction probed with UV resonance Raman spectroscopy: structural elements of specificity.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Protein HU binds specifically to kinked DNA

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Evidence for a regulatory function of the histone-like Escherichia coli protein H-NS in ribosomal RNA synthesis.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Hypothesis: chromosome separation in Escherichia coli involves autocatalytic gene expression, transertion and membrane-domain formation

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

The regulation of transcription initiation by integration host factor.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Integration host factor alleviates the H-NS-mediated repression of the early promoter of bacteriophage Mu

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

The histone-like nucleoid structuring protein H-NS represses the Escherichia coli bgl operon downstream of the promoter

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Structure and partitioning of bacterial DNA: determined by a balance of compaction and expansion forces?

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Yeast Chromatin Subunit Structure

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Retracted: The bacterial condensin MukBEF compacts DNA into a repetitive, stable structure

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Spheroid chromatin units (v bodies).

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

DNA bridging: a property shared among H-NS-like proteins

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Conformational and thermodynamic properties of supercoiled DNA.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

Single molecule elasticity measurements: a biophysical approach to bacterial nucleoid organization

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2005.04598.X

7 January 2021

10.1111/J.1365-2958.2005.04598.X

Identifiers

DOI

2 references

Consolidated OpenCitations Corpus – April 2017

149015

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15853876%20AND%20SRC:MED&resulttype=core&format=json

11 January 2020

149015

1 reference

Consolidated OpenCitations Corpus – April 2017

Consolidated OpenCitations Corpus – April 2017

2 references

149015