(Q24523606)

3 July 2017

Vibrational energy relaxation in proteins (English)

1 reference

3 July 2017

Hiroshi Fujisaki

1

1 reference

PubMed ID

15767588

3 July 2017

John E Straub

series ordinal

2

1 reference

PubMed ID

15767588

3 July 2017

language of work or name

English

0 references

publication date

14 March 2005

1 reference

Proceedings of the National Academy of Sciences of the United States of America

3 July 2017

1 reference

3 July 2017

102

1 reference

3 July 2017

19

1 reference

3 July 2017

6726-6731

1 reference

Molecular dynamics simulation of bacteriorhodopsin's photoisomerization using ab initio forces for the excited chromophore

3 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

VMD: visual molecular dynamics

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Time-dependent quantum methods for large systems

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Vibrational frequency shifts and relaxation rates for a selected vibrational mode in cytochrome C.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Slaving: solvent fluctuations dominate protein dynamics and functions

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Conformational transition states of a beta-hairpin peptide between the ordered and disordered conformations in explicit water

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Conformational dynamics in a dipeptide after single-mode vibrational excitation.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Large vortex-like structure of dipole field in computer models of liquid water and dipole-bridge between biomolecules

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Fast protein dynamics probed with infrared vibrational echo experiments

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Vibrational population relaxation of carbon monoxide in the heme pocket of photolyzed carbonmonoxy myoglobin: comparison of time-resolved mid-IR absorbance experiments and molecular dynamics simulations

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

A study of vibrational relaxation of B-state carbon monoxide in the heme pocket of photolyzed carboxymyoglobin

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Investigating protein dynamics in collective coordinate space

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Simulating energy flow in biomolecules: application to tuna cytochrome c

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Computer simulations of carbon monoxide photodissociation in myoglobin: structural interpretation of the B states.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Molecular dynamics simulations of cooling in laser-excited heme proteins

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Quantum Molecular Dynamics of Ultrafast Processes in Large Polyatomic Systems

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Long-lived amide I vibrational modes in myoglobin.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100765

Vibrational energy flow and chemical reactions

30 May 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409083102

Direct observation of protein vibrations by selective incorporation of spectroscopically observable carbon-deuterium bonds in cytochrome c.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409083102

Protein dynamics and cytochrome c: correlations between ligand vibrations and redox activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409083102

A high-resolution probe of protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409083102

Quantum and classical relaxation rates from classical simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409083102

Structural and dynamical analysis of the hydration of the Alzheimer's beta-amyloid peptide.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409083102

Quantum dynamics in simple fluids

21 January 2018

1 reference

12 December 2020

Conformational dynamics of cytochrome c: correlation to hydrogen exchange

1 reference

12 December 2020

Role of protein-water hydrogen bond dynamics in the protein dynamical transition

1 reference

12 December 2020

Direct observation of cooling of heme upon photodissociation of carbonmonoxy myoglobin

1 reference

12 December 2020

Measurements of the photodissociation quantum yields of MbNO and MbO(2) and the vibrational relaxation of the six-coordinate heme species

1 reference

12 December 2020

Excited-state lifetimes of far-infrared collective modes in proteins

1 reference

12 December 2020

Solvent mobility and the protein 'glass' transition

1 reference

12 December 2020

Conformational dynamics of cytochrome c: Correlation to hydrogen exchange

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409083102

7 January 2021

inferred from DOI database lookup

Energy Flow from Solute to Solvent Probed by Femtosecond IR Spectroscopy: Malachite Green and Heme Protein Solutions

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409083102

7 January 2021

inferred from DOI database lookup

Nonlinear two-dimensional vibrational spectroscopy of peptides

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409083102

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1073/PNAS.0409083102

1 reference

release_ko5uoo2rjbhibjukbvsdpnzbwy

3 July 2017

0 references

1 reference

0 references

0 references

1 reference

PubMed ID

15767588