(Q24621139)

Gene Ontology release 2020-05-02

1 reference

Mizuki Takenaka

1

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Daniil Verbitskiy

series ordinal

2

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Anja Zehrmann

series ordinal

3

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Axel Brennicke

series ordinal

4

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language of work or name

English

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publication date

27 August 2010

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published in

Journal of Biological Chemistry

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volume

285

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issue

35

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page(s)

27122-9

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cites work

Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

Loss of matK RNA editing in seed plant chloroplasts

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

Rice OGR1 encodes a pentatricopeptide repeat-DYW protein and is essential for RNA editing in mitochondria.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

Pentatricopeptide repeat proteins: a socket set for organelle gene expression.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

Sequence-specific binding of a chloroplast pentatricopeptide repeat protein to its native group II intron ligand.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

The process of RNA editing in plant mitochondria

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

Pentatricopeptide repeat (PPR) proteins as sequence-specificity factors in post-transcriptional processes in organelles

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

Conserved domain structure of pentatricopeptide repeat proteins involved in chloroplast RNA editing

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

RNA editing in plant organelles: machinery, physiological function and evolution

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

RNA immunoprecipitation and microarray analysis show a chloroplast Pentatricopeptide repeat protein to be associated with the 5' region of mRNAs whose translation it activates

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

A pentatricopeptide repeat protein is essential for RNA editing in chloroplasts

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L.): comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

Cross-competition in transgenic chloroplasts expressing single editing sites reveals shared cis elements

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

Recognition of RNA editing sites is directed by unique proteins in chloroplasts: biochemical identification of cis-acting elements and trans-acting factors involved in RNA editing in tobacco and pea chloroplasts

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

cis Recognition elements in plant mitochondrion RNA editing

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

The PPR motif - a TPR-related motif prevalent in plant organellar proteins

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

Sequences directing C to U editing of the plastid psbL mRNA are located within a 22 nucleotide segment spanning the editing site

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

In vivo dissection of cis-acting determinants for plastid RNA editing

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

A trans-splicing group I intron and tRNA-hyperediting in the mitochondrial genome of the lycophyte Isoetes engelmannii

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

AtECB2, a pentatricopeptide repeat protein, is required for chloroplast transcript accD RNA editing and early chloroplast biogenesis in Arabidopsis thaliana.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

A comparative genomics approach identifies a PPR-DYW protein that is essential for C-to-U editing of the Arabidopsis chloroplast accD transcript

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

The pentatricopeptide repeat protein PPR5 stabilizes a specific tRNA precursor in maize chloroplasts

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

Organellar RNA editing and plant-specific extensions of pentatricopeptide repeat proteins in jungermanniid but not in marchantiid liverworts

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

An in vitro RNA editing system from cauliflower mitochondria: editing site recognition parameters can vary in different plant species

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

Substrate and cofactor requirements for RNA editing of chloroplast transcripts in Arabidopsis in vitro

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

Extraplastidic site-specific factors mediate RNA editing in chloroplasts

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2930711

RNA editing sites in plant mitochondria can share cis-elements

30 May 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

The mitochondrial PPR protein LOVASTATIN INSENSITIVE 1 plays regulatory roles in cytosolic and plastidial isoprenoid biosynthesis through RNA editing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

The PPR protein encoded by the LOVASTATIN INSENSITIVE 1 gene is involved in RNA editing at three sites in mitochondria of Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

A DYW domain-containing pentatricopeptide repeat protein is required for RNA editing at multiple sites in mitochondria of Arabidopsis thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

A pentatricopeptide repeat protein is a site recognition factor in chloroplast RNA editing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

LPA66 is required for editing psbF chloroplast transcripts in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

CLB19, a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

The Arabidopsis gene YS1 encoding a DYW protein is required for editing of rpoB transcripts and the rapid development of chloroplasts during early growth.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

A conserved DYW domain of the pentatricopeptide repeat protein possesses a novel endoribonuclease activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

The pentatricopeptide repeat protein OTP82 is required for RNA editing of plastid ndhB and ndhG transcripts

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

Multiplex single-base extension typing to identify nuclear genes required for RNA editing in plant organelles

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

A study of new Arabidopsis chloroplast RNA editing mutants reveals general features of editing factors and their target sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

A simple in vitro RNA editing assay for chloroplast transcripts using fluorescent dideoxynucleotides: distinct types of sequence elements required for editing of ndh transcripts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

The pentatricopeptide repeat gene OTP43 is required for trans-splicing of the mitochondrial nad1 Intron 1 in Arabidopsis thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

A pentatricopeptide repeat protein facilitates the trans-splicing of the maize chloroplast rps12 pre-mRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

A hypothesis on the identification of the editing enzyme in plant organelles

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

The multifarious roles of PPR proteins in plant mitochondrial gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

Pentatricopeptide repeat proteins with the DYW motif have distinct molecular functions in RNA editing and RNA cleavage in Arabidopsis chloroplasts

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

The involvement of a PPR protein of the P subfamily in partial RNA editing of an Arabidopsis mitochondrial transcript

21 January 2018

1 reference

12 December 2020

A nucleus-encoded factor, CRR2, is essential for the expression of chloroplast ndhB in Arabidopsis

1 reference

12 December 2020

Formation of the Arabidopsis pentatricopeptide repeat family

1 reference

12 December 2020

Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis

1 reference

12 December 2020

RNA editing in plant mitochondria: assays and biochemical approaches

1 reference

12 December 2020

MEF9, an E-subclass pentatricopeptide repeat protein, is required for an RNA editing event in the nad7 transcript in mitochondria of Arabidopsis

1 reference

12 December 2020

A special issue on TGF-beta signaling

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.128611

7 January 2021