(Q24629019)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23791177%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

title

Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23791177%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

0 references

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23791177%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

author name string

J Ross Buchan

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23791177%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

Regina-Maria Kolaitis

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23791177%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

Roy Parker

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23791177%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

language of work or name

English

0 references

publication date

1 June 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23791177%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23791177%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

volume

153

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23791177%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

page(s)

1461-1474

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23791177%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

issue

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23791177%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

3 March 2020

Cytoscape

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

cites work

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Upf1 ATPase-dependent mRNP disassembly is required for completion of nonsense- mediated mRNA decay

7 April 2017

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Exome sequencing reveals VCP mutations as a cause of familial ALS

7 April 2017

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Dynein and kinesin regulate stress-granule and P-body dynamics

7 April 2017

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Sarcoplasmic redistribution of nuclear TDP-43 in inclusion body myositis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

The deacetylase HDAC6 is a novel critical component of stress granules involved in the stress response

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Ataxin-2 interacts with the DEAD/H-box RNA helicase DDX6 and interferes with P-bodies and stress granules

7 April 2017

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7 April 2017

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Stress granule assembly is mediated by prion-like aggregation of TIA-1

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

TDP-43 aggregation in neurodegeneration: are stress granules the key?

7 April 2017

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Global analysis of yeast mRNPs

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Cdc48/p97 and Shp1/p47 regulate autophagosome biogenesis in concert with ubiquitin-like Atg8

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Cdc48 and Ufd3, new partners of the ubiquitin protease Ubp3, are required for ribophagy

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

P bodies promote stress granule assembly in Saccharomyces cerevisiae

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

A role for Q/N-rich aggregation-prone regions in P-body localization.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Edc3p and a glutamine/asparagine-rich domain of Lsm4p function in processing body assembly in Saccharomyces cerevisiae

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Targeting of aberrant mRNAs to cytoplasmic processing bodies

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Decapping and Decay of Messenger RNA Occur in Cytoplasmic Processing Bodies

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

The Ccz1-Mon1 protein complex is required for the late step of multiple vacuole delivery pathways

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Degradation of lipid vesicles in the yeast vacuole requires function of Cvt17, a putative lipase

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Ubiquitinated TDP-43 in frontotemporal lobar degeneration and amyotrophic lateral sclerosis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Structure-activity relationship study reveals ML240 and ML241 as potent and selective inhibitors of p97 ATPase

7 April 2017

1 reference

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Emerging functions of the VCP/p97 AAA-ATPase in the ubiquitin system

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Reversible inhibitor of p97, DBeQ, impairs both ubiquitin-dependent and autophagic protein clearance pathways

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Multivesicular bodies associate with components of miRNA effector complexes and modulate miRNA activity

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

RNA granules: post-transcriptional and epigenetic modulators of gene expression

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Movement of eukaryotic mRNAs between polysomes and cytoplasmic processing bodies

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Cytoscape 2.8: new features for data integration and network visualization

7 April 2017

1 reference

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P bodies and the control of mRNA translation and degradation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Eukaryotic stress granules: the ins and outs of translation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

VCP is essential for mitochondrial quality control by PINK1/Parkin and this function is impaired by VCP mutations

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Selective autophagy degrades DICER and AGO2 and regulates miRNA activity

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Inhibition of RNA lariat debranching enzyme suppresses TDP-43 toxicity in ALS disease models

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Autophagy activators rescue and alleviate pathogenesis of a mouse model with proteinopathies of the TAR DNA-binding protein 43

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Principles and roles of mRNA localization in animal development

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Mechanisms of dendritic mRNA transport and its role in synaptic tagging.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Cdc48: a power machine in protein degradation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Cytoplasmic mRNP granules at a glance

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Translational regulation of gene expression during conditions of cell stress

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Translational control mechanisms in long-lasting synaptic plasticity and memory

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Dual role of 3-methyladenine in modulation of autophagy via different temporal patterns of inhibition on class I and III phosphoinositide 3-kinase

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Degradation of TDP-43 and its pathogenic form by autophagy and the ubiquitin-proteasome system.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Cells lacking the fragile X mental retardation protein (FMRP) have normal RISC activity but exhibit altered stress granule assembly

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Formation of stress granules inhibits apoptosis by suppressing stress-responsive MAPK pathways

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Impaired protein aggregate handling and clearance underlie the pathogenesis of p97/VCP-associated disease

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

The dynamics of mammalian P body transport, assembly, and disassembly in vivo

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

P bodies, stress granules, and viral life cycles

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Mammalian stress granules and processing bodies

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Inhibition of the ubiquitin-proteasome system induces stress granule formation.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Stress-induced reversal of microRNA repression and mRNA P-body localization in human cells.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Quantitative analysis of Argonaute protein reveals microRNA-dependent localization to stress granules

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Bafilomycin A1 prevents maturation of autophagic vacuoles by inhibiting fusion between autophagosomes and lysosomes in rat hepatoma cell line, H-4-II-E cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

V-ATPase engagement in autophagic processes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

SEPA-1 mediates the specific recognition and degradation of P granule components by autophagy in C. elegans.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Does bafilomycin A1 block the fusion of autophagosomes with lysosomes?

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Live imaging of neuronal degradation by microglia reveals a role for v0-ATPase a1 in phagosomal fusion in vivo

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

TDP-43 in the ubiquitin pathology of frontotemporal dementia with VCP gene mutations.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

RNA sequestration to pathological lesions of neurodegenerative diseases.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3760148

Transient sequestration of TORC1 into stress granules during heat stress

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23791177

12 December 2020

inferred from PubMed ID database lookup

Trans-complex formation by proteolipid channels in the terminal phase of membrane fusion

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23791177

12 December 2020

inferred from PubMed ID database lookup

General translational repression by activators of mRNA decapping

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2013.05.037

7 January 2021

Yeast mRNA decapping enzyme.

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2013.05.037

7 January 2021

Analyzing P-bodies and stress granules in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2013.05.037

7 January 2021

Mechanism of cargo selection in the cytoplasm to vacuole targeting pathway

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2013.05.037

7 January 2021

Global analysis of protein localization in budding yeast

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2013.05.037

7 January 2021

NIH Image to ImageJ: 25 years of image analysis

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2013.05.037

7 January 2021

Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2013.05.037

7 January 2021

Mutations in trans-acting factors affecting mRNA decapping in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2013.05.037

7 January 2021

Localization to, and effects of Pbp1, Pbp4, Lsm12, Dhh1, and Pab1 on stress granules in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2013.05.037

7 January 2021

Cdc48 and cofactors Npl4-Ufd1 are important for G1 progression during heat stress by maintaining cell wall integrity in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2013.05.037

7 January 2021

VCP/p97 is essential for maturation of ubiquitin-containing autophagosomes and this function is impaired by mutations that cause IBMPFD

1 reference

https://api.crossref.org/works/10.1016%2FJ.CELL.2013.05.037

7 January 2021

10.1016/J.CELL.2013.05.037

Identifiers

DOI

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23791177%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23791177%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23791177%20AND%20SRC:MED&resulttype=core&format=json