(Q24673775)

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

cites work

Fast index based algorithms and software for matching position specific scoring matrices

0 references

MATCH: A tool for searching transcription factor binding sites in DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

Profile analysis: detection of distantly related proteins

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

TRANSFAC: transcriptional regulation, from patterns to profiles

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

MatInd and MatInspector: new fast and versatile tools for detection of consensus matches in nucleotide sequence data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

JASPAR: an open-access database for eukaryotic transcription factor binding profiles

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

CisML: an XML-based format for sequence motif detection software

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

Recent improvements to the PROSITE database

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

PRINTS and its automatic supplement, prePRINTS.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

FingerPRINTScan: intelligent searching of the PRINTS motif database.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

Increased coverage of protein families with the blocks database servers

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

Detection of conserved segments in proteins: iterative scanning of sequence databases with alignment blocks

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

Methods for calculating the probabilities of finding patterns in sequences

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

A H+-gated urea channel: the link between Helicobacter pylori urease and gastric colonization

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

Minimal-risk scoring matrices for sequence analysis

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

On the power of profiles for transcription factor binding site detection.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

Using sequence compression to speedup probabilistic profile matching

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

The efficient computation of position-specific match scores with the fast fourier transform.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

Simplified amino acid alphabets for protein fold recognition and implications for folding.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

Approximations to profile score distributions

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1635428

Fast probabilistic analysis of sequence function using scoring matrices

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16930469

12 December 2020

inferred from PubMed ID database lookup

Using substitution probabilities to improve position-specific scoring matrices

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16930469

12 December 2020

inferred from PubMed ID database lookup

Reduction of protein sequence complexity by residue grouping

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16930469

12 December 2020

inferred from PubMed ID database lookup

Reducing the space requirement of suffix trees

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-7-389

7 January 2021

Linear-Time Longest-Common-Prefix Computation in Suffix Arrays and Its Applications

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-7-389

7 January 2021

Modelling Extremal Events

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-7-389

7 January 2021

Replacing suffix trees with enhanced suffix arrays

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-7-389

7 January 2021

Identifiers

DOI

10.1186/1471-2105-7-389

1 reference

journals/bmcbi/BeckstetteHGK06

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1021821282

0 references

1 reference

1 reference

PubMed publication ID

16930469

1 reference